RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 GALR1P47211 349 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 TFPI2P48307 235 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 HBG1P69891 147 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 HBG2P69892 147 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 ARF1P84077 181 aaKnown RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 IZUMO4Q1ZYL8 232 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 CLEC12BQ2HXU8 276 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 C9orf135Q5VTT2 229 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 LEMD1Q68G75 181 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 NUFIP2Q7Z417 695 aaKnown RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 MRPL30Q8TCC3 161 aaKnown RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 RDH5Q92781 318 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 SDSLQ96GA7 329 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 PSENENQ9NZ42 101 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 FOXJ2Q9P0K8 574 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 CACNG5Q9UF02 275 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 APC2O95996 2303 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 A0A096LPE4 126 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 A0A1W2PPZ6 126 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 LRP5LA4QPB2 252 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 CEBPZOSA8MTT3 80 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 KIAA1324LA8MWY0 1029 aaPredicted RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 H7BYZ3 331 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 K7ESF4 209 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 HS3ST1O14792 307 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 SYNGR1O43759 233 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 IAPPP10997 89 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 GDF1P27539 372 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 WNT5AP41221 380 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 FGF8P55075 233 aaPredicted RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 GNB2P62879 340 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 SERF2P84101 59 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 HLA-BQ31612 363 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 ZNF324BQ6AW86 544 aaPredicted RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 SLC23A3Q6PIS1 610 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 MRGPRGQ86SM5 289 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 LINC00596Q86U02 117 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 OR5A2Q8NGI9 324 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 IL1F10Q8WWZ1 152 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 APOBEC3DQ96AK3 386 aaPredicted RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 PCGF1Q9BSM1 259 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 CRIM1Q9NZV1 1036 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 LRRC3CA6NJW4 275 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 ZNHIT1O43257 154 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 GZMHP20718 246 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 CHRNB4P30926 498 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 MDH2P40926 338 aaKnown RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 CDKN1BP46527 198 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 PTTG1IPP53801 180 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 ACSF3Q4G176 576 aaPredicted RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 C20orf204Q6ZNR8 217 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 Q6ZRM9 215 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 TIPARPQ7Z3E1 657 aaKnown RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 ZNF295-AS1Q8N0V1 137 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 ZNF525Q8N782 197 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 TMEM105Q8N8V8 129 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 OR10V1Q8NGI7 309 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 LSM10Q969L4 123 aaKnown RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 TMEM45BQ96B21 275 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 C20orf144Q9BQM9 153 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 VSIRQ9H7M9 311 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 RBM7Q9Y580 266 aaKnown RBP7.39□□□□□ -1.23
VCL-207ENST00000624354 AKAP13Q12802 2813 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 TNFSF13O75888 250 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 SPINK2P20155 84 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 CNN1P51911 297 aaKnown RBP7.38□□□□□ -1.23
VCL-207ENST00000624354 RANP62826 216 aaKnown RBP7.38□□□□□ -1.23
VCL-207ENST00000624354 ZNF726P1Q15940 193 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 TOMM20LQ6UXN7 152 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 PINX1Q96BK5 328 aaKnown RBP7.38□□□□□ -1.23
VCL-207ENST00000624354 ZNF552Q9H707 407 aaPredicted RBP7.38□□□□□ -1.23
VCL-207ENST00000624354 MSL2Q9HCI7 577 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 DOCK7Q96N67 2140 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 TRBV6-6A0A0A6YYG2 114 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 LRRC75BQ2VPJ9 315 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 ACTL10Q5JWF8 245 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 OR51G1Q8NGK1 321 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 ZCCHC14Q8WYQ9 949 aaKnown RBP7.38□□□□□ -1.23
VCL-207ENST00000624354 NAT8Q9UHE5 227 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 CHD3Q12873 2000 aaKnown RBP7.38□□□□□ -1.23
VCL-207ENST00000624354 CEP192Q8TEP8 1941 aa7.38□□□□□ -1.23
VCL-207ENST00000624354 MAP1LC3B2A6NCE7 125 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 DEGS1O15121 323 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 OTX2P32243 289 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 ARL16Q0P5N6 197 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 TMEM41BQ5BJD5 291 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 ZNF488Q96MN9 340 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 LINC00470Q9BZP3 86 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 MAP1LC3BQ9GZQ8 125 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 PRSS50Q9UI38 385 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 ARHGAP21Q5T5U3 1957 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 ANKRD30BLA7E2S9 258 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 IGHEP01854 428 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 WNT2P09544 360 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 ZNF16P17020 682 aaPredicted RBP7.37□□□□□ -1.23
VCL-207ENST00000624354 SOX8P57073 446 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 SELENOTP62341 195 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 TMEM241Q24JQ0 296 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 SPANXN5Q5MJ07 72 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 CST9LP1Q5W188 147 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms