RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 IFNGR2P38484 337 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 AQP4P55087 323 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 TAS2R45P59539 299 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 ACTBP60709 375 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 ACTG1P63261 375 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 CENPWQ5EE01 88 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 C10orf55Q5SWW7 151 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 LYZL1Q6UWQ5 148 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 AMTNQ6UX39 209 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 TMEM75Q8N9X5 138 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 OR1L8Q8NGR8 309 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 OR5K1Q8NHB7 308 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 ABHD14BQ96IU4 210 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 FBXO44Q9H4M3 255 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 RMND1Q9NWS8 449 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 SMARCA4P51532 1647 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 GLI3P10071 1580 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 REREQ9P2R6 1566 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 E7EWF7 191 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 SC5DO75845 299 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 KRTAP2-3P0C7H8 128 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 BGNP21810 368 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 CCNOP22674 350 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 RANBP1P43487 201 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 SULT1A2P50226 295 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 STC1P52823 247 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 RBM11P57052 281 aaKnown RBP-0.36□□□□□ -2.47
CASC4-211ENST00000561305 LINC00313P59037 77 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 PLPPR5Q32ZL2 321 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 MTERF4Q7Z6M4 381 aaKnown RBP-0.36□□□□□ -2.47
CASC4-211ENST00000561305 SYS1Q8N2H4 156 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 Q8N6K4 173 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 FAM45AQ8TCE6 357 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 KRTAP2-4Q9BYR9 128 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 KRTAP2-1Q9BYU5 128 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 NKX6-2Q9C056 277 aaPredicted RBP-0.36□□□□□ -2.47
CASC4-211ENST00000561305 LINC00527Q9UJ94 153 aa-0.36□□□□□ -2.47
CASC4-211ENST00000561305 A0A1W2PPV4 95 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 UBE2L6O14933 153 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 KDELR3O43731 214 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 STK16O75716 305 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 VAPBO95292 243 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 PSMG1O95456 288 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 SNAI1O95863 264 aaPredicted RBP-0.37□□□□□ -2.47
CASC4-211ENST00000561305 DYNLL1P63167 89 aaKnown RBP-0.37□□□□□ -2.47
CASC4-211ENST00000561305 CD164Q04900 197 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 TBC1D28Q2M2D7 210 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 TMEM31Q5JXX7 168 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 FAM173BQ6P4H8 233 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 CCDC112Q8NEF3 446 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 METTL8Q9H825 291 aaKnown RBP-0.37□□□□□ -2.47
CASC4-211ENST00000561305 DMAC2Q9NW81 257 aa-0.37□□□□□ -2.47
CASC4-211ENST00000561305 KCPQ6ZWJ8 1503 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 CNTRLQ7Z7A1 2325 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 IGHV1-18A0A0C4DH31 117 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 KLRC4O43908 158 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 OR13C7P0DN81 318 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 RNASE3P12724 160 aaKnown RBP-0.38□□□□□ -2.47
CASC4-211ENST00000561305 CD79BP40259 229 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 CCR2P41597 374 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 CAVIN4Q5BKX8 364 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 SLC13A5Q86YT5 568 aaPredicted RBP-0.38□□□□□ -2.47
CASC4-211ENST00000561305 PLCZ1Q86YW0 608 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 C9orf163Q8N9P6 203 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 OR2D3Q8NGH3 330 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 OR4A15Q8NGL6 344 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 RPS4Y2Q8TD47 263 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 MED28Q9H204 178 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 STMN3Q9NZ72 180 aa-0.38□□□□□ -2.47
CASC4-211ENST00000561305 TXNDC9O14530 226 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 CYTH3O43739 400 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 CRYGCP07315 174 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 REG1BP48304 166 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 DAPP51397 102 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 EMP1P54849 157 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 OR51H1Q8NH63 302 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 LGALS14Q8TCE9 139 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 GAL3ST2Q9H3Q3 398 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 SLC2A9Q9NRM0 540 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 TAAR3PQ9P1P4 343 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 GMEB1Q9Y692 573 aa-0.39□□□□□ -2.47
CASC4-211ENST00000561305 DMBT1Q9UGM3 2413 aaPredicted RBP-0.4□□□□□ -2.47
CASC4-211ENST00000561305 A0A0D9SEW6 157 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 hCG_2039718K7EN88 272 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 FABP7O15540 132 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 ORC5O43913 435 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 PID1Q7Z2X4 250 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 SPATA12Q7Z6I5 190 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 ZNF565Q8N9K5 539 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 OR13C9Q8NGT0 318 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 KIAA1143Q96AT1 154 aaPredicted RBP-0.4□□□□□ -2.47
CASC4-211ENST00000561305 CCDC127Q96BQ5 260 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 OR51B6Q9H340 312 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 TMBIM4Q9HC24 238 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 MS4A12Q9NXJ0 267 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 COL7A1Q02388 2944 aa-0.4□□□□□ -2.47
CASC4-211ENST00000561305 SCAF11Q99590 1463 aaKnown RBP-0.41□□□□□ -2.47
CASC4-211ENST00000561305 MBP02144 154 aa-0.41□□□□□ -2.48
CASC4-211ENST00000561305 DEKP35659 375 aaKnown RBP-0.41□□□□□ -2.48
CASC4-211ENST00000561305 AQP5P55064 265 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms