RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 WWC2-AS2Q96NR7 200 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 AGMATQ9BSE5 352 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 CCDC90BQ9GZT6 254 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 SCOCQ9UIL1 159 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 FOXA2Q9Y261 457 aaPredicted RBP11.01□□□□□ -0.65
SNX6-210ENST00000557341 AK6Q9Y3D8 172 aaKnown RBP11.01□□□□□ -0.65
SNX6-210ENST00000557341 FBXO7Q9Y3I1 522 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 LSM4Q9Y4Z0 139 aaKnown RBP11.01□□□□□ -0.65
SNX6-210ENST00000557341 NHLRC4P0CG21 123 aaPredicted RBP11□□□□□ -0.65
SNX6-210ENST00000557341 CEACAM6P40199 344 aa11□□□□□ -0.65
SNX6-210ENST00000557341 CX3CL1P78423 397 aa11□□□□□ -0.65
SNX6-210ENST00000557341 PYHIN1Q6K0P9 492 aa11□□□□□ -0.65
SNX6-210ENST00000557341 OR56B1Q8NGI3 324 aa11□□□□□ -0.65
SNX6-210ENST00000557341 NRG4Q8WWG1 115 aa11□□□□□ -0.65
SNX6-210ENST00000557341 ARHGAP5-AS1Q96IT6 56 aa11□□□□□ -0.65
SNX6-210ENST00000557341 RNF5Q99942 180 aa11□□□□□ -0.65
SNX6-210ENST00000557341 CMSS1Q9BQ75 279 aaKnown RBP11□□□□□ -0.65
SNX6-210ENST00000557341 PECRQ9BY49 303 aa11□□□□□ -0.65
SNX6-210ENST00000557341 C11orf54Q9H0W9 315 aaPredicted RBP11□□□□□ -0.65
SNX6-210ENST00000557341 Q9N2K0 584 aa11□□□□□ -0.65
SNX6-210ENST00000557341 RNF150Q9ULK6 438 aa11□□□□□ -0.65
SNX6-210ENST00000557341 ZNF256Q9Y2P7 627 aaPredicted RBP11□□□□□ -0.65
SNX6-210ENST00000557341 A3GALT2U3KPV4 340 aa11□□□□□ -0.65
SNX6-210ENST00000557341 OVOL1O14753 267 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 SOX15O60248 233 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 SPDEFO95238 335 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 LGALS1P09382 135 aaKnown RBP10.99□□□□□ -0.65
SNX6-210ENST00000557341 SCTP09683 121 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 CRHBPP24387 322 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 TMEM50BP56557 158 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 CLDN12P56749 244 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 FABP5Q01469 135 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 TMEM267Q0VDI3 215 aaPredicted RBP10.99□□□□□ -0.65
SNX6-210ENST00000557341 PRSS48Q7RTY5 328 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 PDPNQ86YL7 162 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 PTX4Q96A99 478 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 FAM3DQ96BQ1 224 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 MGLLQ99685 303 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 METTL1Q9UBP6 276 aaKnown RBP10.99□□□□□ -0.65
SNX6-210ENST00000557341 ZNF221Q9UK13 617 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 V9GY05 133 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 STAB2Q8WWQ8 2551 aa10.99□□□□□ -0.65
SNX6-210ENST00000557341 DENRO43583 198 aaKnown RBP10.98□□□□□ -0.65
SNX6-210ENST00000557341 LY86O95711 162 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 APOA2P02652 100 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 SERPINB10P48595 397 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 PSMD7P51665 324 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 MRPS15P82914 257 aaKnown RBP10.98□□□□□ -0.65
SNX6-210ENST00000557341 TBCEQ15813 527 aaPredicted RBP10.98□□□□□ -0.65
SNX6-210ENST00000557341 ACTBL2Q562R1 376 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 CD200R1LQ6Q8B3 271 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 ZNF429Q86V71 674 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 DRAXINQ8NBI3 349 aaPredicted RBP10.98□□□□□ -0.65
SNX6-210ENST00000557341 CASTOR1Q8WTX7 329 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 DCUN1D4Q92564 292 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 TSNAXQ99598 290 aaKnown RBP10.98□□□□□ -0.65
SNX6-210ENST00000557341 ALX4Q9H161 411 aaPredicted RBP10.98□□□□□ -0.65
SNX6-210ENST00000557341 VCX3BQ9H321 246 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 ACOT13Q9NPJ3 140 aa10.98□□□□□ -0.65
SNX6-210ENST00000557341 IGKV1-6A0A0C4DH72 117 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 TRDCB7Z8K6 153 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 LINC01619G3V211 115 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 FCN1O00602 326 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 CA2P00918 260 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 IGKV1-16P04430 117 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 TFAP2AP05549 437 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 CD40LGP29965 261 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 SLURP1P55000 103 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 PSG5Q15238 335 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 C2orf76Q3KRA6 126 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 PLAC9Q5JTB6 97 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 HES5Q5TA89 166 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 UNQ5815/PRO19632Q6UWF5 114 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 PPP1R27Q86WC6 154 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.97□□□□□ -0.65
SNX6-210ENST00000557341 OR4A4PQ8NGN8 299 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 CLCC1Q96S66 551 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 FAM103A1Q9BTL3 118 aaKnown RBP10.97□□□□□ -0.65
SNX6-210ENST00000557341 TOLLIPQ9H0E2 274 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 RDH8Q9NYR8 311 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 BLOC1S6Q9UL45 172 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 GAB2Q9UQC2 676 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 NUBP2Q9Y5Y2 271 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 U3KQK5 164 aa10.97□□□□□ -0.65
SNX6-210ENST00000557341 TMEM272A0A1B0GTI8 110 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 LDLRAD4O15165 306 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 PROP1O75360 226 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 SAP30O75446 220 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 CD3GP09693 182 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 EGR2P11161 476 aaPredicted RBP10.96□□□□□ -0.65
SNX6-210ENST00000557341 MAP2K4P45985 399 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 HSPA13P48723 471 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 TPPP2P59282 170 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 AKIRIN2Q53H80 203 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 ZNF562Q6V9R5 426 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 ZNF367Q7RTV3 350 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 ZNF383Q8NA42 475 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 LFNGQ8NES3 379 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 ARPC1AQ92747 370 aa10.96□□□□□ -0.65
SNX6-210ENST00000557341 RAB3CQ96E17 227 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms