RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 DTYMKP23919 212 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 TALDO1P37837 337 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 RPL23AP62750 156 aaKnown RBP16.11■□□□□ 0.17
VTI1B-205ENST00000555543 SLC35B1P78383 322 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 ARL6IP1Q15041 203 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 SRSF7Q16629 238 aaKnown RBP eCLIP16.11■□□□□ 0.17
VTI1B-205ENST00000555543 C5orf64Q2M2E5 130 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 ZNF260Q3ZCT1 412 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 HACD4Q5VWC8 232 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 Q6ZS49 121 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 NPBQ8NG41 125 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 OR5AN1Q8NGI8 311 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 OR10J5Q8NHC4 309 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 C5orf30Q96GV9 206 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 VCX3AQ9NNX9 186 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 SCOCQ9UIL1 159 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 ZNF221Q9UK13 617 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 DIRAS3O95661 229 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 HLA-DRB1P01911 266 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 CFHR3Q02985 330 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 BEAN1Q3B7T3 259 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 TIMM50Q3ZCQ8 353 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 LCNL1Q6ZST4 164 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 ZNF383Q8NA42 475 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 OR2D2Q9H210 308 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 WASHC3Q9Y3C0 194 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 ETV7Q9Y603 341 aa16.1■□□□□ 0.17
VTI1B-205ENST00000555543 IGHV7-81A0A0B4J1V7 117 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 AIREO43918 545 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 SSX5O60225 188 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 SCGNO76038 276 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 IGF1P05019 195 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 GSTP1P09211 210 aaKnown RBP16.09■□□□□ 0.17
VTI1B-205ENST00000555543 OR8U9P0C7N5 309 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 SMIM18P0DKX4 95 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 SCAND1P57086 179 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 LSM3P62310 102 aaKnown RBP16.09■□□□□ 0.17
VTI1B-205ENST00000555543 OXLD1Q5BKU9 147 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 ETV3LQ6ZN32 361 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 COMMD1Q8N668 190 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 OR8U1Q8NH10 309 aa16.09■□□□□ 0.17
VTI1B-205ENST00000555543 H7C2Y5 167 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 M0R1X1 148 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 PF4P02776 101 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 IGKV1-16P04430 117 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 MC5RP33032 325 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 PNLIPRP3Q17RR3 467 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 PDLIM3Q53GG5 364 aaPredicted RBP16.08■□□□□ 0.16
VTI1B-205ENST00000555543 TEX38Q6PEX7 206 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.08■□□□□ 0.16
VTI1B-205ENST00000555543 ST6GALNAC5Q9BVH7 336 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 FBXL15Q9H469 300 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 KIAA1456Q9P272 454 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 TGP01266 2768 aa16.08■□□□□ 0.16
VTI1B-205ENST00000555543 RRHO14718 337 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 ATP6V0E1O15342 81 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 RPLP1P05386 114 aaKnown RBP16.07■□□□□ 0.16
VTI1B-205ENST00000555543 TFAP2AP05549 437 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 RPS19P39019 145 aaKnown RBP16.07■□□□□ 0.16
VTI1B-205ENST00000555543 GNG2P59768 71 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 NDPQ00604 133 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 KPRPQ5T749 579 aaPredicted RBP16.07■□□□□ 0.16
VTI1B-205ENST00000555543 C8orf86Q6ZUL3 223 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 H1FOOQ8IZA3 346 aaPredicted RBP16.07■□□□□ 0.16
VTI1B-205ENST00000555543 WFDC9Q8NEX5 89 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 GINS4Q9BRT9 223 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 GON7Q9BXV9 100 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 MRPS26Q9BYN8 205 aaKnown RBP16.07■□□□□ 0.16
VTI1B-205ENST00000555543 OR51J1Q9H342 316 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 PARP11Q9NR21 331 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 SDHAF2Q9NX18 166 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 ZNF580Q9UK33 172 aa16.07■□□□□ 0.16
VTI1B-205ENST00000555543 G3V318 75 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 RBBP9O75884 186 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 IGHG4P01861 327 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 VDAC1P21796 283 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 FOXE3Q13461 319 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 LIN54Q6MZP7 749 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 RNF152Q8N8N0 203 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 KLHL30-AS1Q8NEE0 82 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 DCSTAMPQ9H295 470 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 ZFP57Q9NU63 452 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 SPATA2Q9UM82 520 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 FBXO7Q9Y3I1 522 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 WSB1Q9Y6I7 421 aa16.06■□□□□ 0.16
VTI1B-205ENST00000555543 TRAV18A0A075B6X5 111 aa16.05■□□□□ 0.16
VTI1B-205ENST00000555543 NUDT19A8MXV4 375 aa16.05■□□□□ 0.16
VTI1B-205ENST00000555543 FCN1O00602 326 aa16.05■□□□□ 0.16
VTI1B-205ENST00000555543 IGLL1P15814 213 aa16.05■□□□□ 0.16
VTI1B-205ENST00000555543 CD33P20138 364 aa16.05■□□□□ 0.16
VTI1B-205ENST00000555543 PITPNAQ00169 270 aa16.05■□□□□ 0.16
VTI1B-205ENST00000555543 FUNDC2Q9BWH2 189 aa16.05■□□□□ 0.16
VTI1B-205ENST00000555543 GAB2Q9UQC2 676 aa16.05■□□□□ 0.16
VTI1B-205ENST00000555543 APOA2P02652 100 aa16.04■□□□□ 0.16
VTI1B-205ENST00000555543 PRB2P02812 416 aaPredicted RBP16.04■□□□□ 0.16
VTI1B-205ENST00000555543 ELANEP08246 267 aa16.04■□□□□ 0.16
VTI1B-205ENST00000555543 PSG5Q15238 335 aa16.04■□□□□ 0.16
VTI1B-205ENST00000555543 CXorf66Q5JRM2 361 aaPredicted RBP16.04■□□□□ 0.16
VTI1B-205ENST00000555543 PDPNQ86YL7 162 aa16.04■□□□□ 0.16
VTI1B-205ENST00000555543 ZNF695Q8IW36 515 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms