RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MPPED2Q15777 294 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 UBE2SQ16763 222 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TEX30Q5JUR7 227 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 SAXO2Q658L1 398 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 CYB5R2Q6BCY4 276 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 SHISA6Q6ZSJ9 500 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 GID4Q8IVV7 300 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 UBALD2Q8IYN6 164 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ORMDL3Q8N138 153 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 MFSD8Q8NHS3 518 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 SLC37A2Q8TED4 501 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 CLDN23Q96B33 292 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 FXYD5Q96DB9 178 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 DGCR14Q96DF8 476 aaKnown RBP2.86□□□□□ -1.95
SCAF11-210ENST00000547654 PHYHIPLQ96FC7 376 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 IMP4Q96G21 291 aaKnown RBP2.86□□□□□ -1.95
SCAF11-210ENST00000547654 C18orf15Q96N68 181 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 CHCHD7Q9BUK0 85 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 BCL2L14Q9BZR8 327 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 WFDC1Q9HC57 220 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 C8orf17Q9NRJ1 99 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TAS2R5Q9NYW4 299 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TMEM216Q9P0N5 145 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ZNRD1Q9P1U0 126 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TAC3Q9UHF0 121 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 PRELID1Q9Y255 219 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 POLR1DQ9Y2S0 133 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF337Q9Y3M9 751 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 SAMHD1Q9Y3Z3 626 aaKnown RBP2.86□□□□□ -1.95
SCAF11-210ENST00000547654 UBR2Q8IWV8 1755 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ROCK1Q13464 1354 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ITPR3Q14573 2671 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 COL4A4P53420 1690 aaPredicted RBP2.85□□□□□ -1.95
SCAF11-210ENST00000547654 TEX15Q9BXT5 2789 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 SCN2AQ99250 2005 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 DSPP15924 2871 aaKnown RBP2.85□□□□□ -1.95
SCAF11-210ENST00000547654 TEX50A0A1B0GTY4 177 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 KLLNB2CW77 178 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 TCF21O43680 179 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 KCNK2O95069 426 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 CXorf1O96002 111 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 HBZP02008 142 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 IMPA1P29218 277 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 PMELP40967 661 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 RPS10P46783 165 aaKnown RBP2.85□□□□□ -1.95
SCAF11-210ENST00000547654 SULT1A1P50225 295 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 NUDT2P50583 147 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 MP68P56378 58 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 RAB2AP61019 212 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 CXCR4P61073 352 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 DR1Q01658 176 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 LOXL1Q08397 574 aaPredicted RBP2.85□□□□□ -1.95
SCAF11-210ENST00000547654 SKP2Q13309 424 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 CASP8Q14790 479 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 RNASE13Q5GAN3 156 aaKnown RBP2.85□□□□□ -1.95
SCAF11-210ENST00000547654 SPIN3Q5JUX0 258 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 GLYATQ6IB77 296 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 FAM173BQ6P4H8 233 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 CCDC121Q6ZUS5 278 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 ZDHHC22Q8N966 263 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 OR2Z1Q8NG97 314 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 OR10G2Q8NGC3 310 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 OR10D3Q8NH80 312 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 ELSPBP1Q96BH3 223 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 TAMM41Q96BW9 452 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF799Q96GE5 643 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 NARS2Q96I59 477 aaKnown RBP2.85□□□□□ -1.95
SCAF11-210ENST00000547654 EBNA1BP2Q99848 306 aaKnown RBP2.85□□□□□ -1.95
SCAF11-210ENST00000547654 DKKL1Q9UK85 242 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 BTRCQ9Y297 605 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 ARL2BPQ9Y2Y0 163 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 CFAP46Q8IYW2 2715 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 PRRC2AP48634 2157 aaKnown RBP2.85□□□□□ -1.95
SCAF11-210ENST00000547654 A0A1W2PP64 1363 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 DOCK3Q8IZD9 2030 aa2.85□□□□□ -1.95
SCAF11-210ENST00000547654 ECM29Q5VYK3 1845 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 DUOX1Q9NRD9 1551 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 HECTD1Q9ULT8 2610 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 IGKV6-21A0A0C4DH24 114 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 A8MWL6 223 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 K7EPK0 472 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 M0QYV0 167 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 IGKV3-15P01624 115 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 HLA-DQA1P01909 254 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 C1GALT1C1LP0DN25 315 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 GADD45AP24522 165 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 CCR7P32248 378 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 CAPZBP47756 277 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF83P51522 516 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 H2BFSP57053 126 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 ERVS71-1P61550 626 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 DAD1P61803 113 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 SYCNQ0VAF6 134 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF79Q15937 498 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 HIST3H3Q16695 136 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 TMEM241Q24JQ0 296 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 HENMT1Q5T8I9 393 aaKnown RBP2.84□□□□□ -1.95
SCAF11-210ENST00000547654 HIST2H3PS2Q5TEC6 136 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 C1orf195Q5TG92 126 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms