RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PGAM2P15259 253 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 COX5AP20674 150 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BOP23527 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 GADD45AP24522 165 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HTR1DP28221 377 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HTR1EP28566 365 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 FGF9P31371 208 aaPredicted RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BBP33778 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 DAP3P51398 398 aaKnown RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 ZNF140P52738 457 aaPredicted RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 HMGCS2P54868 508 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 RAB38P57729 211 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 OR12D2P58182 307 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BDP58876 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 RAB10P61026 200 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BCP62807 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 EDDM3AQ14507 147 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST2H2BEQ16778 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 Q1RN00 199 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 GSG1Q2KHT4 349 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 TTLL9Q3SXZ7 439 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 TRMT12Q53H54 448 aaKnown RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 TMEM97Q5BJF2 176 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 TMEM78Q5T7P6 136 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 AGTRAPQ6RW13 159 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 GTF2H5Q6ZYL4 71 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 NEGR1Q7Z3B1 354 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 TMEM25Q86YD3 366 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SLC22A18ASQ8N1D0 253 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 CA13Q8N1Q1 262 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 LRRC25Q8N386 305 aaPredicted RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 ARIH2OSQ8N7S6 290 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 FER1L6-AS1Q8NA97 138 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 OR2A12Q8NGT7 310 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 OR2Y1Q8NGV0 311 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 OR6N2Q8NGY6 317 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 OR13C6PQ8NH95 151 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HAVCR2Q8TDQ0 301 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 RXFP2Q8WXD0 754 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BHQ93079 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SLC25A46Q96AG3 418 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 WDR34Q96EX3 536 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 DIRAS2Q96HU8 199 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 CIB3Q96Q77 187 aaPredicted RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 TSPAN32Q96QS1 320 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 PEBP4Q96S96 227 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BNQ99877 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BMQ99879 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HSPB9Q9BQS6 159 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 DOHHQ9BU89 302 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 NUDT9Q9BW91 350 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 NMRAL1Q9HBL8 299 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 PRR34Q9NV39 138 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 ASF1BQ9NVP2 202 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 TMEM242Q9NWH2 141 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 ZNF586Q9NXT0 402 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 DHRS4-AS1Q9P1J3 65 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 UQCR10Q9UDW1 63 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 CACFD1Q9UGQ2 172 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SLC2A6Q9UGQ3 507 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SS18L2Q9UHA2 77 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SIGLEC7Q9Y286 467 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 BCORQ6W2J9 1755 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 KIDINS220Q9ULH0 1771 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 TOGARAM1Q9Y4F4 1720 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 LAMB2P55268 1798 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SCN9AQ15858 1988 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 TRAV9-2A0A087WT02 112 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 A0A087WX48 190 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 TRAV19A0A0A6YYK7 116 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 A0A0B4J2A0 478 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 KIR2DS1A0A191URI9 304 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 A0A1W2PPV9 198 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 KANTRA0A1W2PQU2 76 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 TMEM150BA6NC51 233 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ZNF705GA8MUZ8 300 aaPredicted RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 IDSB3KWA1 339 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 B4DEV8 164 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SULT2B1O00204 365 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SLC16A7O60669 478 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ZNF253O75346 499 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ENTPD6O75354 484 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 LYPD3O95274 346 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SLC2A10O95528 541 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 LIPCP11150 499 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 LAMP1P11279 417 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ERGP11308 486 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SLC25A4P12235 298 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 CXCL3P19876 107 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 PMCHP20382 165 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 IDSP22304 550 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 NFYBP25208 207 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ADORA2BP29275 332 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 GABRA3P34903 492 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 LEPP41159 167 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 KIR2DS4P43632 304 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 RPS10P46783 165 aaKnown RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 SULT1A1P50225 295 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SULT1A2P50226 295 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms