RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, human

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNN1A-215	ENST00000540037	CA6	P23280	308 aa		11.75	□□□□□ -0.53
SCNN1A-215	ENST00000540037	GCH1	P30793	250 aa		11.75	□□□□□ -0.53
SCNN1A-215	ENST00000540037	MPL	P40238	635 aa		11.75	□□□□□ -0.53
SCNN1A-215	ENST00000540037	GBGT1	Q8N5D6	347 aa		11.75	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TMEM204	Q9BSN7	226 aa		11.75	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ZFHX4	Q86UP3	3567 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	GDF1	P27539	372 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037		Q0VFX4	171 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TDRG1	Q3Y452	100 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	CST9LP1	Q5W188	147 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TMEM14EP	Q6UXP3	125 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	SAXO1	Q8IYX7	474 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TRAPPC2L	Q9UL33	140 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	DSP	P15924	2871 aa	Known RBP	11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037		A6NNC1	897 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TMEM250	H0YL14	139 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	DEGS1	O15121	323 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ZG16	O60844	167 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	GGCT	O75223	188 aa	Known RBP	11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	CELA3A	P09093	270 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	C1QTNF9	P0C862	333 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	HNF1A	P20823	631 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	CNN1	P51911	297 aa	Known RBP	11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TCEAL6	Q6IPX3	200 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TUSC5	Q8IXB3	177 aa		11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037	UBE2Z	Q9H832	354 aa	Predicted RBP	11.74	□□□□□ -0.53
SCNN1A-215	ENST00000540037		A0A0U1RQK1	487 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ZNF320	A2RRD8	509 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	GRIFIN	A4D1Z8	144 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	COX5B	P10606	129 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	HOXA6	P31267	233 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ATP5G3	P48201	142 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	WDR54	Q9H977	334 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	FKBP11	Q9NYL4	201 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	CTXND1	A0A1B0GTU2	59 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	EPHA8	P29322	1005 aa	Predicted RBP	11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	RPL29	P47914	159 aa	Known RBP	11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	CEBPD	P49716	269 aa	Predicted RBP	11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	RPL30	P62888	115 aa	Known RBP	11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	C5orf30	Q96GV9	206 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	DOCK10	Q96BY6	2186 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TRAV38-1	A0A0B4J264	116 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	C11orf94	C9JXX5	98 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	DNPH1	O43598	174 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	IQCJ	Q1A5X6	159 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ACSF3	Q4G176	576 aa	Predicted RBP	11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	OR5A2	Q8NGI9	324 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	KCNE4	Q8WWG9	221 aa		11.73	□□□□□ -0.53
SCNN1A-215	ENST00000540037	IGFBP4	P22692	258 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037		Q6P435	159 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	SDSL	Q96GA7	329 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	RIMS4	Q9H426	269 aa	Predicted RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TRAPPC1	Q9Y5R8	145 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	PDGFB	P01127	241 aa	Predicted RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TFF1	P04155	84 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ZNF25	P17030	456 aa	Predicted RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	BTF3	P20290	206 aa	Known RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	OTX2	P32243	289 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	RPL15	P61313	204 aa	Known RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	GNB1	P62873	340 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	SPINK14	Q6IE38	97 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	LINC01551	Q86U37	167 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	NEIL1	Q96FI4	390 aa	Predicted RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	PCED1A	Q9H1Q7	454 aa		11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	LIN7C	Q9NUP9	197 aa	Known RBP	11.72	□□□□□ -0.53
SCNN1A-215	ENST00000540037	NDUFB4	O95168	129 aa		11.71	□□□□□ -0.53
SCNN1A-215	ENST00000540037	OR2H2	O95918	312 aa		11.71	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ERVFC1-1	P60608	527 aa		11.71	□□□□□ -0.53
SCNN1A-215	ENST00000540037	CISD2	Q8N5K1	135 aa	Known RBP	11.71	□□□□□ -0.53
SCNN1A-215	ENST00000540037	ANAPC16	Q96DE5	110 aa		11.71	□□□□□ -0.53
SCNN1A-215	ENST00000540037	NPCDR1	Q9BY65	106 aa		11.71	□□□□□ -0.53
SCNN1A-215	ENST00000540037	TRBV6-6	A0A0A6YYG2	114 aa		11.71	□□□□□ -0.54
SCNN1A-215	ENST00000540037	ODAM	A1E959	279 aa		11.71	□□□□□ -0.54
SCNN1A-215	ENST00000540037	PMS2P5	A8MQ11	134 aa		11.71	□□□□□ -0.54
SCNN1A-215	ENST00000540037	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.71	□□□□□ -0.54
SCNN1A-215	ENST00000540037	S1PR2	O95136	353 aa		11.71	□□□□□ -0.54
SCNN1A-215	ENST00000540037	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.71	□□□□□ -0.54
SCNN1A-215	ENST00000540037	TMEM68	Q96MH6	324 aa		11.71	□□□□□ -0.54
SCNN1A-215	ENST00000540037	IL17B	Q9UHF5	180 aa		11.71	□□□□□ -0.54
SCNN1A-215	ENST00000540037	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	ZNF705D	P0CH99	300 aa	Predicted RBP	11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	ZNF705B	P0CI00	300 aa	Predicted RBP	11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	TDGF1P3	P51864	188 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	BRWD1-AS2	P59051	145 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	WDR86	Q86TI4	376 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	OR2Y1	Q8NGV0	311 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	SAP25	Q8TEE9	199 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	IMMP2L	Q96T52	175 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	STRADB	Q9C0K7	418 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	TYMS	P04818	313 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	RAB4B	P61018	213 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	C3AR1	Q16581	482 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	POM121L2	Q96KW2	1035 aa		11.7	□□□□□ -0.54
SCNN1A-215	ENST00000540037	TBX15	Q96SF7	602 aa		11.7	□□□□□ -0.54

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