RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 RNLSQ5VYX0 342 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 CBR4Q8N4T8 237 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 GRPEL2Q8TAA5 225 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 APH1BQ8WW43 257 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 PYDC1Q8WXC3 89 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 ABHD14BQ96IU4 210 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 TSNAXQ99598 290 aaKnown RBP11.16□□□□□ -0.62
CSTF3-204ENST00000524556 SULT4A1Q9BR01 284 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 PLEKHA3Q9HB20 300 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 PEF1Q9UBV8 284 aaKnown RBP11.16□□□□□ -0.62
CSTF3-204ENST00000524556 ADAM30Q9UKF2 790 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 A0A1W2PPK0 400 aa11.15□□□□□ -0.62
CSTF3-204ENST00000524556 ITGB1BP1O14713 200 aa11.15□□□□□ -0.62
CSTF3-204ENST00000524556 BRI3O95415 125 aa11.15□□□□□ -0.62
CSTF3-204ENST00000524556 DCKP27707 260 aa11.15□□□□□ -0.62
CSTF3-204ENST00000524556 CD81P60033 236 aa11.15□□□□□ -0.62
CSTF3-204ENST00000524556 ZNF343Q6P1L6 599 aa11.15□□□□□ -0.62
CSTF3-204ENST00000524556 LINC00476Q8WZB0 136 aa11.15□□□□□ -0.62
CSTF3-204ENST00000524556 AGMATQ9BSE5 352 aa11.15□□□□□ -0.62
CSTF3-204ENST00000524556 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.62
CSTF3-204ENST00000524556 LOC100130705A0A1B0GUX0 176 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 RBMY1BA6NDE4 496 aaKnown RBP11.14□□□□□ -0.63
CSTF3-204ENST00000524556 RBMY1EA6NEQ0 496 aaKnown RBP11.14□□□□□ -0.63
CSTF3-204ENST00000524556 TPPPO94811 219 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 IGKV1-16P04430 117 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 RBMY1DP0C7P1 496 aaKnown RBP11.14□□□□□ -0.63
CSTF3-204ENST00000524556 CPEP16870 476 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 AADACP22760 399 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 CAPGP40121 348 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 RASSF2P50749 326 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
CSTF3-204ENST00000524556 SSBP2P81877 361 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-204ENST00000524556 ZNF880Q6PDB4 577 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 FAM46BQ96A09 425 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 PGLYRP3Q96LB9 341 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 NEDD4LQ96PU5 975 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 NEURL2Q9BR09 285 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 FAAP24Q9BTP7 215 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 TINAGL1Q9GZM7 467 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-204ENST00000524556 PCLOQ9Y6V0 5065 aa11.14□□□□□ -0.63
CSTF3-204ENST00000524556 SLC25A17O43808 307 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 PROP1O75360 226 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 WBP4O75554 376 aaKnown RBP11.13□□□□□ -0.63
CSTF3-204ENST00000524556 OR2A4O95047 310 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 CNIH1O95406 144 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 SMN1Q16637 294 aaKnown RBP11.13□□□□□ -0.63
CSTF3-204ENST00000524556 RPEL1Q2QD12 228 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 LAX1Q8IWV1 398 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 SVOPQ8N4V2 548 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 DEFB125Q8N687 156 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 ZFP41Q8N8Y5 198 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
CSTF3-204ENST00000524556 TMEM68Q96MH6 324 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 UQCC2Q9BRT2 126 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 C11orf54Q9H0W9 315 aaPredicted RBP11.13□□□□□ -0.63
CSTF3-204ENST00000524556 GHRLQ9UBU3 117 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 CLEC2DQ9UHP7 191 aa11.13□□□□□ -0.63
CSTF3-204ENST00000524556 H3BNX3 289 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 CIB2O75838 187 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 NAPSAO96009 420 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 CEACAM6P40199 344 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 LINC00205P59089 165 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 DYRK1AQ13627 763 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 C6orf201Q7Z4U5 140 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 PDPNQ86YL7 162 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 ZNF383Q8NA42 475 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 BVESQ8NE79 360 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 USMG5Q96IX5 58 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 DERL3Q96Q80 235 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 SLC29A1Q99808 456 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 SLC2A8Q9NY64 477 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
CSTF3-204ENST00000524556 EXOSC1Q9Y3B2 195 aaKnown RBP11.12□□□□□ -0.63
CSTF3-204ENST00000524556 ZNF785A8K8V0 405 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 AIREO43918 545 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 ATP5HO75947 161 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 LY6G6CO95867 125 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 CD7P09564 240 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 MYL12AP19105 171 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 DEFA5Q01523 94 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 PJVKQ0ZLH3 352 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
CSTF3-204ENST00000524556 NKAIN3Q8N8D7 197 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 SETD6Q8TBK2 473 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 EDARADDQ8WWZ3 215 aa11.11□□□□□ -0.63
CSTF3-204ENST00000524556 CHMP1AQ9HD42 196 aaPredicted RBP11.11□□□□□ -0.63
CSTF3-204ENST00000524556 DIMT1Q9UNQ2 313 aaKnown RBP11.11□□□□□ -0.63
CSTF3-204ENST00000524556 IRGMA1A4Y4 181 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 RBMXL2O75526 392 aaKnown RBP11.1□□□□□ -0.63
CSTF3-204ENST00000524556 IGLV2-23P01705 113 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 CRYGBP07316 175 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 UBBP0CG47 229 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 LGALS7P47929 136 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 RPS27AP62979 156 aaKnown RBP11.1□□□□□ -0.63
CSTF3-204ENST00000524556 OR10K2Q6IF99 312 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 MOB1BQ7L9L4 216 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 ZNF485Q8NCK3 441 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 SNAPC3Q92966 411 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms