RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	AGMAT	Q9BSE5	352 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	HIPK2	Q9H2X6	1198 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	PIPOX	Q9P0Z9	390 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	OR1A1	Q9P1Q5	309 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	STEAP1	Q9UHE8	339 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	BOLA1	Q9Y3E2	137 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	TNC	P24821	2201 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	C13orf42	A0A1B0GVH6	325 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	RBBP9	O75884	186 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	ZP3	P21754	424 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	CD40LG	P29965	261 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	MC5R	P33032	325 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	PJVK	Q0ZLH3	352 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	FXYD3	Q14802	87 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	CDH26	Q8IXH8	852 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	ZNF383	Q8NA42	475 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	POC5	Q8NA72	575 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	KCNK15	Q9H427	330 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	PLEKHA3	Q9HB20	300 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	ABRACL	Q9P1F3	81 aa		10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	DIMT1	Q9UNQ2	313 aa	Known RBP	10.4	□□□□□ -0.74
SAMM50-204	ENST00000493161	ALMS1	Q8TCU4	4167 aa		10.4	□□□□□ -0.75
SAMM50-204	ENST00000493161		H0Y980	276 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	RBMXL2	O75526	392 aa	Known RBP	10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	NAPSA	O96009	420 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	HTR2C	P28335	458 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	RPS16	P62249	146 aa	Known RBP	10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	DYRK1A	Q13627	763 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	INSL4	Q14641	139 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	ZNF880	Q6PDB4	577 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	GTSCR1	Q86UQ5	136 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	SETD6	Q8TBK2	473 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	NEDD4L	Q96PU5	975 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	RNF5	Q99942	180 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	NICN1	Q9BSH3	213 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	LRRC42	Q9Y546	428 aa		10.39	□□□□□ -0.75
SAMM50-204	ENST00000493161	DYNC1I1	O14576	645 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	SLC22A1	O15245	554 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	SLC25A17	O43808	307 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	ATP5H	O75947	161 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	CPE	P16870	476 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	MYL12A	P19105	171 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	CEACAM6	P40199	344 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	MECP2	P51608	486 aa	Known RBP	10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	RPS27A	P62979	156 aa	Known RBP	10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	C9orf16	Q9BUW7	83 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161	CEPT1	Q9Y6K0	416 aa		10.38	□□□□□ -0.75
SAMM50-204	ENST00000493161		A0A0A6YYD4	124 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	RBMY1B	A6NDE4	496 aa	Known RBP	10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	RBMY1E	A6NEQ0	496 aa	Known RBP	10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	IGLV2-23	P01705	113 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	RBMY1D	P0C7P1	496 aa	Known RBP	10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	APELA	P0DMC3	54 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	UNC119	Q13432	240 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	LCN12	Q6JVE5	192 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	ZNF343	Q6P1L6	599 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	TMEM80	Q96HE8	168 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	TSNAX	Q99598	290 aa	Known RBP	10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	UQCC2	Q9BRT2	126 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	WFDC10A	Q9H1F0	79 aa		10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161	PEF1	Q9UBV8	284 aa	Known RBP	10.37	□□□□□ -0.75
SAMM50-204	ENST00000493161		A0A0G2JLM5	398 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	SHISA3	A0PJX4	238 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161		H3BUA1	57 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	CNIH1	O95406	144 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	BRI3	O95415	125 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	CD7	P09564	240 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	SCT	P09683	121 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	CD81	P60033	236 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	ZFP1	Q6P2D0	407 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161		Q8N402	240 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	DEFB125	Q8N687	156 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	NKAIN3	Q8N8D7	197 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	IL17D	Q8TAD2	202 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	GGH	Q92820	318 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	TINAGL1	Q9GZM7	467 aa	Predicted RBP	10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	SIGLEC8	Q9NYZ4	499 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	GHRL	Q9UBU3	117 aa		10.36	□□□□□ -0.75
SAMM50-204	ENST00000493161	IGKV1-6	A0A0C4DH72	117 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	ZNF785	A8K8V0	405 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	ITGB1BP1	O14713	200 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	SPDEF	O95238	335 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	CRYGB	P07316	175 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	CEL	P19835	753 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	EDN2	P20800	178 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	MRGPRG-AS1	Q2M3A8	158 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	MOGAT2	Q3SYC2	334 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	CD300E	Q496F6	205 aa	Predicted RBP	10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	LRRTM1	Q86UE6	522 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	PDPN	Q86YL7	162 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	BVES	Q8NE79	360 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	NEURL2	Q9BR09	285 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	TMEM59	Q9BXS4	323 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	FAM53C	Q9NYF3	392 aa		10.35	□□□□□ -0.75
SAMM50-204	ENST00000493161	AK3	Q9UIJ7	227 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms