RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	GAL	P22466	123 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	LINC00205	P59089	165 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	FHL3	Q13643	280 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR10R2	Q8NGX6	335 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR8U1	Q8NH10	309 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	EDARADD	Q8WWZ3	215 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	RAB3C	Q96E17	227 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	CHCHD6	Q9BRQ6	235 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	TOLLIP	Q9H0E2	274 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	GHITM	Q9H3K2	345 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	PARP11	Q9NR21	331 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	RDH8	Q9NYR8	311 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	SMIM30	A4D0T7	59 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	FCN1	O00602	326 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	RRH	O14718	337 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	HSPA12A	O43301	675 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	FCGR3A	P08637	254 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	CD3G	P09693	182 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	HIST1H1D	P16402	221 aa	Known RBP	11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	GNB3	P16520	340 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	RAB6A	P20340	208 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	MYL9	P24844	172 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	LIN54	Q6MZP7	749 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	ZNF383	Q8NA42	475 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	MINDY2	Q8NBR6	621 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR4A4P	Q8NGN8	299 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	C4orf3	Q8WVX3	66 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	MAFIP	Q8WZ33	124 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	CABLES2	Q9BTV7	478 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	FBXL15	Q9H469	300 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	GNB4	Q9HAV0	340 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	KIAA1456	Q9P272	454 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	WASHC3	Q9Y3C0	194 aa		11.71	□□□□□ -0.53
CCNL1-222	ENST00000479596	TRAV41	A0A0B4J266	112 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	FABP7	O15540	132 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	SOX15	O60248	233 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	IGKV1-16	P04430	117 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	GSTT2	P0CG29	244 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	GSTT2B	P0CG30	244 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	EGR2	P11161	476 aa	Predicted RBP	11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	MC5R	P33032	325 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	RANBP1	P43487	201 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	CRIP2	P52943	208 aa	Predicted RBP	11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	CX3CL1	P78423	397 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	IGSF11	Q5DX21	431 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	ZNF491	Q8N8L2	437 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	C5orf30	Q96GV9	206 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	MCRIP2	Q9BUT9	160 aa	Known RBP	11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	GPR61	Q9BZJ8	451 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	TXNL4B	Q9NX01	149 aa	Known RBP	11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596	GAB2	Q9UQC2	676 aa		11.7	□□□□□ -0.54
CCNL1-222	ENST00000479596		A0A075B6Q4	140 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	IGKV1D-8	A0A087WSZ0	117 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	TRBV6-7	A0A0A0MS04	114 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596		H7C2Y5	167 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	RBBP9	O75884	186 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	PSMB9	P28065	219 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	FGF9	P31371	208 aa	Predicted RBP	11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	RAB25	P57735	213 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	ASPHD1	Q5U4P2	390 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	UBE2E2	Q96LR5	201 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	RNF5	Q99942	180 aa		11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596	ELF5	Q9UKW6	265 aa	Predicted RBP	11.69	□□□□□ -0.54
CCNL1-222	ENST00000479596		I3L521	148 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	BET1	O15155	118 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	TFAP2A	P05549	437 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	SERPINB10	P48595	397 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	RAB9A	P51151	201 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	LUM	P51884	338 aa	Predicted RBP	11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	GNB1	P62873	340 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	RUNX1	Q01196	453 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	PSG5	Q15238	335 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	ECSCR	Q19T08	205 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	FCGR1B	Q92637	280 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	TPSG1	Q9NRR2	321 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	ZNF221	Q9UK13	617 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	STUB1	Q9UNE7	303 aa		11.68	□□□□□ -0.54
CCNL1-222	ENST00000479596	NOTO	A8MTQ0	251 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596		M0R1X1	148 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	DIRAS3	O95661	229 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	GSTP1	P09211	210 aa	Known RBP	11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	GADD45A	P24522	165 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	SSBP2	P81877	361 aa	Predicted RBP	11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	MRPS15	P82914	257 aa	Known RBP	11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	ZNF773	Q6PK81	442 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596		Q6ZS49	121 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	PDPN	Q86YL7	162 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	OR11H1	Q8NG94	326 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	OR5M8	Q8NGP6	311 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	CASTOR1	Q8WTX7	329 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	DPF1	Q92782	380 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	OR2D2	Q9H210	308 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596		Q9H521	79 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.67	□□□□□ -0.54	8e-14	■□□□□ 8.9
CCNL1-222	ENST00000479596	SDHAF2	Q9NX18	166 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms