RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SAT2Q96F10 170 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-205ENST00000466192 ARV1Q9H2C2 271 aa15.17■□□□□ 0.02
COL9A3-205ENST00000466192 NDRG3Q9UGV2 375 aa15.17■□□□□ 0.02
COL9A3-205ENST00000466192 RNF115Q9Y4L5 304 aa15.17■□□□□ 0.02
COL9A3-205ENST00000466192 PKD1L2Q7Z442 2459 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 RAB19A4D1S5 217 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 PLAUP00749 431 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 APOC3P02656 99 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 CD3EP07766 207 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 TEX36Q5VZQ5 186 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 BTNL3Q6UXE8 466 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 TMEM252Q8N6L7 170 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 LSM10Q969L4 123 aaKnown RBP15.16■□□□□ 0.02
COL9A3-205ENST00000466192 CCL13Q99616 98 aa15.16■□□□□ 0.02
COL9A3-205ENST00000466192 HIVEP3Q5T1R4 2406 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 ZNF98A6NK75 572 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 RNF212BA8MTL3 300 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 RAMP3O60896 148 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 CST7O76096 145 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 SFTPCP11686 197 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 SLC25A6P12236 298 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 MUC1P15941 1255 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-205ENST00000466192 RPL30P62888 115 aaKnown RBP15.15■□□□□ 0.02
COL9A3-205ENST00000466192 EIF4EBP1Q13541 118 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-205ENST00000466192 ZNF788Q6ZQV5 615 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 HSD17B11Q8NBQ5 300 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 ZBTB34Q8NCN2 500 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 SLC25A31Q9H0C2 315 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 SAP30LQ9HAJ7 183 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 YLPM1P49750 1951 aaKnown RBP15.15■□□□□ 0.02
COL9A3-205ENST00000466192 HCFC1P51610 2035 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 FAM216BQ8N7L0 139 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 C14orf79Q96F83 325 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 GINS3Q9BRX5 216 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 SH3BGRL3Q9H299 93 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 ZNF665Q9H7R5 613 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 MMP26Q9NRE1 261 aa15.15■□□□□ 0.02
COL9A3-205ENST00000466192 ZMAT5Q9UDW3 170 aaKnown RBP15.15■□□□□ 0.02
COL9A3-205ENST00000466192 ST8SIA5O15466 376 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 SIAH2O43255 324 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 ODF3L1Q8IXM7 274 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 FGFRL1Q8N441 504 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 TMEM217Q8N7C4 229 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 AGMATQ9BSE5 352 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 EGLN1Q9GZT9 426 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 PSG11Q9UQ72 335 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 LRBAP50851 2863 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 LRRC30A6NM36 301 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 KIAA1324LA8MWY0 1029 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-205ENST00000466192 H3BP45 60 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 CGB3P0DN86 165 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 CGB7P0DN87 165 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 APOBEC3AP31941 199 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-205ENST00000466192 HOXA1P49639 335 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-205ENST00000466192 PAX9P55771 341 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 SRSF3P84103 164 aaKnown RBP15.14■□□□□ 0.01
COL9A3-205ENST00000466192 UQCC3Q6UW78 93 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 OR5C1Q8NGR4 320 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 SAV1Q9H4B6 383 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-205ENST00000466192 NCOR1P1Q9H4R4 102 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 OR6C3Q9NZP0 311 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 ABCA4P78363 2273 aa15.14■□□□□ 0.01
COL9A3-205ENST00000466192 H2AFB1P0C5Y9 115 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 SEC11BP0C7V7 166 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 SPP1P10451 314 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 MMP9P14780 707 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 LOXL3P58215 753 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 ZNF816Q0VGE8 651 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-205ENST00000466192 MORN2Q502X0 79 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 Q6ZRG5 221 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 CA5BP1Q8WTZ4 195 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 DYNLRB1Q9NP97 96 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 FAM212BQ9NTI7 297 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-205ENST00000466192 CALYQ9NYX4 217 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 JPT1Q9UK76 154 aa15.13■□□□□ 0.01
COL9A3-205ENST00000466192 F2RL2O00254 374 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 DYNLT3P51808 116 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 ARHGDIBP52566 201 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 LINC00205P59089 165 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 SWI5Q1ZZU3 235 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 C17orf58Q2M2W7 97 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 TCTEX1D2Q8WW35 142 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 LRRC46Q96FV0 321 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 FAM234AQ9H0X4 552 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 GNG12Q9UBI6 72 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 IGHV3-7P01780 117 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 BLOC1S1P78537 153 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 CATR1Q13166 79 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 ZNF266Q14584 549 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 EFNB3Q15768 340 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 MSMO1Q15800 293 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 Q3ZCU0 254 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 TCF23Q7RTU1 214 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 ZNF295-AS1Q8N0V1 137 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 SPAG16Q8N0X2 631 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 TMEM231Q9H6L2 316 aa15.12■□□□□ 0.01
COL9A3-205ENST00000466192 FAM74A7A6NL05 159 aa15.11■□□□□ 0.01
COL9A3-205ENST00000466192 C17orf98A8MV24 154 aa15.11■□□□□ 0.01
COL9A3-205ENST00000466192 TMEM178BH3BS89 294 aa15.11■□□□□ 0.01
COL9A3-205ENST00000466192 CLDN1O95832 211 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms