RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 VWA1Q6PCB0 445 aa9.9□□□□□ -0.83
NPHP4-204ENST00000460696 MRPL41Q8IXM3 137 aaKnown RBP9.9□□□□□ -0.83
NPHP4-204ENST00000460696 RAB39BQ96DA2 213 aa9.9□□□□□ -0.83
NPHP4-204ENST00000460696 NGBQ9NPG2 151 aa9.9□□□□□ -0.83
NPHP4-204ENST00000460696 TUBD1Q9UJT1 453 aa9.9□□□□□ -0.83
NPHP4-204ENST00000460696 TIMM8BQ9Y5J9 83 aaPredicted RBP9.9□□□□□ -0.83
NPHP4-204ENST00000460696 ABCA12Q86UK0 2595 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 GLIPR1P48060 266 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 UHRF2Q96PU4 802 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 ABHD14AQ9BUJ0 271 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 KIAA1456Q9P272 454 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 CLDN34H7C241 214 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 APOA2P02652 100 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 S100A8P05109 93 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 PRDX2P32119 198 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 RND3P61587 244 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 PSG7Q13046 419 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 TMEM41BQ5BJD5 291 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 DRAM1Q8N682 238 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 C22orf15Q8WYQ4 148 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 SMIM8Q96KF7 97 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 GTF3C1Q12789 2109 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 ZNF705FA8MVS1 300 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-204ENST00000460696 FGF16O43320 207 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 OR7C2O60412 319 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 ZNF705DP0CH99 300 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-204ENST00000460696 ZNF705BP0CI00 300 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-204ENST00000460696 CTRB1P17538 263 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 CTRB2Q6GPI1 263 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 MYPOPQ86VE0 399 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-204ENST00000460696 OR10X1Q8NGY0 326 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 CCL17Q92583 94 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 OR4C12Q96R67 309 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 TMEM147Q9BVK8 224 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 COMMD5Q9GZQ3 224 aa9.89□□□□□ -0.83
NPHP4-204ENST00000460696 MRPS18CQ9Y3D5 142 aaKnown RBP9.89□□□□□ -0.83
NPHP4-204ENST00000460696 WDFY4Q6ZS81 3184 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 TRBV6-7A0A0A0MS04 114 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 LILRA1O75019 489 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 TFF1P04155 84 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 UCP1P25874 307 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 HIST1H3AP68431 136 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 BTNL8Q6UX41 500 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 BCL2L2Q92843 193 aaPredicted RBP9.88□□□□□ -0.83
NPHP4-204ENST00000460696 HS3ST6Q96QI5 342 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 TMEM210A6NLX4 147 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 SSTR5P35346 364 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 NRN1LQ496H8 165 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 OR8G5Q8NG78 346 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 AURKAIP1Q9NWT8 199 aaPredicted RBP9.88□□□□□ -0.83
NPHP4-204ENST00000460696 ANKHD1Q8IWZ3 2542 aaKnown RBP9.88□□□□□ -0.83
NPHP4-204ENST00000460696 GZMHP20718 246 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 MDKP21741 143 aaPredicted RBP9.88□□□□□ -0.83
NPHP4-204ENST00000460696 TNFSF10P50591 281 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 GABRA6Q16445 453 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 TMEM241Q24JQ0 296 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 MRPL30Q8TCC3 161 aaKnown RBP9.88□□□□□ -0.83
NPHP4-204ENST00000460696 WDYHV1Q96HA8 205 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 FAM210BQ96KR6 192 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 OR51I2Q9H344 312 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 PATZ1Q9HBE1 687 aaKnown RBP9.88□□□□□ -0.83
NPHP4-204ENST00000460696 RFNGQ9Y644 331 aa9.88□□□□□ -0.83
NPHP4-204ENST00000460696 ZNF98A6NK75 572 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 TMPRSS2O15393 492 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 MGST1P10620 155 aaKnown RBP9.87□□□□□ -0.83
NPHP4-204ENST00000460696 CHRNA7P36544 502 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 CDC34P49427 236 aaPredicted RBP9.87□□□□□ -0.83
NPHP4-204ENST00000460696 SSMEM1Q8WWF3 244 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 TMEM37Q8WXS4 190 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 PLSCR2Q9NRY7 297 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 USP9YO00507 2555 aaPredicted RBP9.87□□□□□ -0.83
NPHP4-204ENST00000460696 SMPD2O60906 423 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 IGHV1-2P23083 117 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 MEOX2P50222 304 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 RTL8BQ17RB0 113 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 WFDC1Q9HC57 220 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 HECTD1Q9ULT8 2610 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 WIPI2Q9Y4P8 454 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 IGKV3D-15A0A087WSY6 115 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 TRAV24A0A0B4J272 114 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 TDGF1P13385 188 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 WNT5AP41221 380 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 RBMXL3Q8N7X1 1067 aaKnown RBP9.87□□□□□ -0.83
NPHP4-204ENST00000460696 PLPPR1Q8TBJ4 325 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 LEAP2Q969E1 77 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 OR2V2Q96R30 315 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 KCNIP2Q9NS61 270 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 RPRMQ9NS64 109 aa9.87□□□□□ -0.83
NPHP4-204ENST00000460696 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
NPHP4-204ENST00000460696 GAR1Q9NY12 217 aaKnown RBP9.87□□□□□ -0.83
NPHP4-204ENST00000460696 MPV17P39210 176 aa9.86□□□□□ -0.83
NPHP4-204ENST00000460696 CCL8P80075 99 aa9.86□□□□□ -0.83
NPHP4-204ENST00000460696 MRPS11P82912 194 aaKnown RBP9.86□□□□□ -0.83
NPHP4-204ENST00000460696 Q6ZT83 130 aa9.86□□□□□ -0.83
NPHP4-204ENST00000460696 FOXL2NBQ6ZUU3 175 aa9.86□□□□□ -0.83
NPHP4-204ENST00000460696 ACY3Q96HD9 319 aa9.86□□□□□ -0.83
NPHP4-204ENST00000460696 C18orf12Q96KH6 178 aa9.86□□□□□ -0.83
NPHP4-204ENST00000460696 DCTN5Q9BTE1 182 aa9.86□□□□□ -0.83
NPHP4-204ENST00000460696 LIME1Q9H400 295 aa9.86□□□□□ -0.83
NPHP4-204ENST00000460696 OR6C3Q9NZP0 311 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms