RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 LY6HO94772 140 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 SERPINE2P07093 398 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 SOD3P08294 240 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 PET100P0DJ07 73 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 LINC00205P59089 165 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 SRSF3P84103 164 aaKnown RBP17.46■□□□□ 0.39
PTPRF-207ENST00000436724 HFEQ30201 348 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 BBC3Q96PG8 261 aaPredicted RBP17.46■□□□□ 0.39
PTPRF-207ENST00000436724 F2RL2O00254 374 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 ADAM20O43506 726 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 ZNF134P52741 427 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 RPL30P62888 115 aaKnown RBP17.46■□□□□ 0.39
PTPRF-207ENST00000436724 JPT1Q9UK76 154 aa17.46■□□□□ 0.39
PTPRF-207ENST00000436724 KBTBD11-OT1A0A1B0GTJ5 212 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 FAM74A7A6NL05 159 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 TNFRSF13BO14836 293 aaPredicted RBP17.45■□□□□ 0.38
PTPRF-207ENST00000436724 IGKV1-39P01597 117 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 IGKV1D-39P04432 117 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 AGAP20933 346 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 ERVFRD-1P60508 538 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 FAM74A3Q4VXF1 159 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 ZNF585BQ52M93 769 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 OR2B11Q5JQS5 317 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 NCOR1P1Q9H4R4 102 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 CTSZQ9UBR2 303 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 CLN8Q9UBY8 286 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 A0A0G2JRQ6 117 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 ATG12O94817 140 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 IZUMO4Q1ZYL8 232 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 NMSQ5H8A3 153 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 RPL7L1Q6DKI1 246 aaKnown RBP17.45■□□□□ 0.38
PTPRF-207ENST00000436724 NKX6-2Q9C056 277 aaPredicted RBP17.45■□□□□ 0.38
PTPRF-207ENST00000436724 C19orf12Q9NSK7 152 aa17.45■□□□□ 0.38
PTPRF-207ENST00000436724 DEDDO75618 318 aa17.44■□□□□ 0.38
PTPRF-207ENST00000436724 MMP23AO75900 390 aa17.44■□□□□ 0.38
PTPRF-207ENST00000436724 ADCYAP1P18509 176 aa17.44■□□□□ 0.38
PTPRF-207ENST00000436724 VDAC1P21796 283 aa17.44■□□□□ 0.38
PTPRF-207ENST00000436724 EIF4EBP1Q13541 118 aaPredicted RBP17.44■□□□□ 0.38
PTPRF-207ENST00000436724 A0A1W2PPE3 182 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 K7EPK0 472 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 SLC31A2O15432 143 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 RAMP3O60896 148 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 Q3ZCU0 254 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 FAM71E2Q8N5Q1 922 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 OR4D5Q8NGN0 318 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 PLEKHF2Q9H8W4 249 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 LIN7CQ9NUP9 197 aaKnown RBP17.43■□□□□ 0.38
PTPRF-207ENST00000436724 ZNF705EA8MWA4 302 aaPredicted RBP17.43■□□□□ 0.38
PTPRF-207ENST00000436724 TOR1AO14656 332 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 TAAR5O14804 337 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 YPEL1O60688 119 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 NXPH3O95157 252 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 WNT2P09544 360 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 NFYBP25208 207 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 PPOXP50336 477 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 YPEL2Q96QA6 119 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 MMP26Q9NRE1 261 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 CBLN4Q9NTU7 201 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 LPAR3Q9UBY5 353 aa17.43■□□□□ 0.38
PTPRF-207ENST00000436724 PROP1O75360 226 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 EPHA1P21709 976 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 RPL12P30050 165 aaKnown RBP17.42■□□□□ 0.38
PTPRF-207ENST00000436724 RPL31P62899 125 aaKnown RBP17.42■□□□□ 0.38
PTPRF-207ENST00000436724 EDARADDQ8WWZ3 215 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 IL22RA2Q969J5 263 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 PLA2G2EQ9NZK7 142 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 NUDT19A8MXV4 375 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 DVL1O14640 695 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 BRWD1-AS2P59051 145 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 C10orf91Q5T1B1 145 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 C11orf71Q6IPW1 123 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 ZBTB34Q8NCN2 500 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 H1FXQ92522 213 aaKnown RBP17.42■□□□□ 0.38
PTPRF-207ENST00000436724 SMIM8Q96KF7 97 aa17.42■□□□□ 0.38
PTPRF-207ENST00000436724 USP9XQ93008 2570 aaPredicted RBP17.41■□□□□ 0.38
PTPRF-207ENST00000436724 LINC00473A8K010 186 aa17.41■□□□□ 0.38
PTPRF-207ENST00000436724 GUCA2BQ16661 112 aa17.41■□□□□ 0.38
PTPRF-207ENST00000436724 CXorf66Q5JRM2 361 aaPredicted RBP17.41■□□□□ 0.38
PTPRF-207ENST00000436724 PRAMEF5Q5TYX0 476 aa17.41■□□□□ 0.38
PTPRF-207ENST00000436724 GFOD1Q9NXC2 390 aa17.41■□□□□ 0.38
PTPRF-207ENST00000436724 LAMP3Q9UQV4 416 aa17.41■□□□□ 0.38
PTPRF-207ENST00000436724 DUXBA0A1W2PPF3 345 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 hADV38S2A0JD32 116 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 NDUFB3O43676 98 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 DANCRP0C864 163 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 CCL3L1P16619 93 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 PJVKQ0ZLH3 352 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 SMCO1Q147U7 214 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 PUSL1Q8N0Z8 303 aaKnown RBP17.4■□□□□ 0.38
PTPRF-207ENST00000436724 TCTEX1D2Q8WW35 142 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 CORO2AQ92828 525 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 GPR146Q96CH1 333 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 SAT2Q96F10 170 aaPredicted RBP17.4■□□□□ 0.38
PTPRF-207ENST00000436724 TSNAXQ99598 290 aaKnown RBP17.4■□□□□ 0.38
PTPRF-207ENST00000436724 IFI27L2Q9H2X8 130 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 ZC4H2Q9NQZ6 224 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 LINC00312Q9Y6C7 94 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 TACC2O95359 2948 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 MYO18BQ8IUG5 2567 aa17.4■□□□□ 0.38
PTPRF-207ENST00000436724 ZNF729A6NN14 1252 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms