RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 DEGS1O15121 323 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 AMBPP02760 352 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 CTXN2P0C2S0 81 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 ZNF883P0CG24 379 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 MMP9P14780 707 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 CEBPDP49716 269 aaPredicted RBP8.8□□□□□ -1
CLSTN1-203ENST00000435891 RNPS1Q15287 305 aaKnown RBP8.8□□□□□ -1
CLSTN1-203ENST00000435891 IQCJQ1A5X6 159 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 TMEM164Q5U3C3 297 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 CST9LP1Q5W188 147 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 SP5Q6BEB4 398 aaPredicted RBP8.8□□□□□ -1
CLSTN1-203ENST00000435891 ZNF66Q6ZN08 573 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 MPC1Q9Y5U8 109 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 SMG1Q96Q15 3661 aaKnown RBP8.8□□□□□ -1
CLSTN1-203ENST00000435891 RBFOX3A6NFN3 312 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 OR5B21A6NL26 309 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 DVL1O14640 695 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 FBXW9Q5XUX1 488 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 CLEC2AQ6UVW9 174 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 GCNT2Q8N0V5 402 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 WDYHV1Q96HA8 205 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 RYDENQ9NUL5 291 aaKnown RBP8.8□□□□□ -1
CLSTN1-203ENST00000435891 EP300Q09472 2414 aaPredicted RBP8.8□□□□□ -1
CLSTN1-203ENST00000435891 CDIPTO14735 213 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 TNFSF15O95150 251 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 OR2H2O95918 312 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 ARL16Q0P5N6 197 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 SCCPDHQ8NBX0 429 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 CACNA1HO95180 2353 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 TRBV6-6A0A0A6YYG2 114 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 IGKV1-5P01602 117 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 TFF1P04155 84 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 SERPINE2P07093 398 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 LINC00614P0C842 121 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 IAPPP10997 89 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 ERVFC1-1P60608 527 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 RAB11AP62491 216 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 OR10V1Q8NGI7 309 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 RNASE8Q8TDE3 154 aaKnown RBP8.79□□□□□ -1
CLSTN1-203ENST00000435891 TVP23CQ96ET8 276 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 RSG1Q9BU20 258 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 PLK3Q9H4B4 646 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 CACNG5Q9UF02 275 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 SVILO95425 2214 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 TTC28Q96AY4 2481 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 IRF2P14316 349 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 ZNF16P17020 682 aaPredicted RBP8.79□□□□□ -1
CLSTN1-203ENST00000435891 ZNF585BQ52M93 769 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 TMEM18Q96B42 140 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 VSIRQ9H7M9 311 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 DUXBA0A1W2PPF3 345 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 J3QT63 122 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 WDR1O75083 606 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 SP9P0CG40 484 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 MRPS11P82912 194 aaKnown RBP8.79□□□□□ -1
CLSTN1-203ENST00000435891 TEX38Q6PEX7 206 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 CYB561D1Q8N8Q1 229 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 LAMP3Q9UQV4 416 aa8.79□□□□□ -1
CLSTN1-203ENST00000435891 KLF13Q9Y2Y9 288 aaPredicted RBP8.79□□□□□ -1
CLSTN1-203ENST00000435891 DOCK11Q5JSL3 2073 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 LYZL6O75951 148 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 HNF4GQ14541 408 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 ICAM4Q14773 271 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 HAPLN4Q86UW8 402 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 CXorf67Q86X51 503 aaPredicted RBP8.78□□□□□ -1
CLSTN1-203ENST00000435891 LFNGQ8NES3 379 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 PARD6AQ9NPB6 346 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 WSB1Q9Y6I7 421 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 KLRC4-KLRK1H3BQV0 150 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.78□□□□□ -1
CLSTN1-203ENST00000435891 SRP19P09132 144 aaKnown RBP8.78□□□□□ -1
CLSTN1-203ENST00000435891 HES3Q5TGS1 186 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 WDR25Q64LD2 544 aaPredicted RBP8.78□□□□□ -1
CLSTN1-203ENST00000435891 LINC00596Q86U02 117 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 OR5T1Q8NG75 326 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 IL22RA2Q969J5 263 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 ABHD14BQ96IU4 210 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 ATP5SQ99766 215 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 PKIBQ9C010 78 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 TRAPPC2LQ9UL33 140 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 A0A1B0GW64 132 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 SMPD2O60906 423 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 ERVK11-1P61568 191 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 RPL23AP62750 156 aaKnown RBP8.78□□□□□ -1
CLSTN1-203ENST00000435891 BAXQ07812 192 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 SRSF6Q13247 344 aaKnown RBP8.78□□□□□ -1
CLSTN1-203ENST00000435891 SLC25A24Q6NUK1 477 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 ZNF497Q6ZNH5 498 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 OR1P1Q8NH06 330 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 KCNS2Q9ULS6 477 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 RPH3ALQ9UNE2 315 aa8.78□□□□□ -1
CLSTN1-203ENST00000435891 TRGV5A0A0B4J1U4 118 aa8.77□□□□□ -1
CLSTN1-203ENST00000435891 M0QZK8 103 aa8.77□□□□□ -1
CLSTN1-203ENST00000435891 GGCTO75223 188 aaKnown RBP8.77□□□□□ -1
CLSTN1-203ENST00000435891 GRPP07492 148 aa8.77□□□□□ -1
CLSTN1-203ENST00000435891 TNFSF10P50591 281 aa8.77□□□□□ -1
CLSTN1-203ENST00000435891 TLE1Q04724 770 aa8.77□□□□□ -1
CLSTN1-203ENST00000435891 TOMM20LQ6UXN7 152 aa8.77□□□□□ -1
CLSTN1-203ENST00000435891 ZNF826PQ6ZT77 177 aa8.77□□□□□ -1
CLSTN1-203ENST00000435891 TMEM183AQ8IXX5 376 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms