RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SLC6A1P30531 599 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 TMEM65Q6PI78 240 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 GLDNQ6ZMI3 551 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-205ENST00000427897 NR2C2APQ86WQ0 139 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 CLVS1Q8IUQ0 354 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-205ENST00000427897 RAB2BQ8WUD1 216 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 PTX4Q96A99 478 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 PARP12Q9H0J9 701 aaKnown RBP16.27■□□□□ 0.2
HSPG2-205ENST00000427897 RDH8Q9NYR8 311 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 FCGR3AP08637 254 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 CT45A6P0DMU7 189 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 CT45A5P0DMU8 189 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 CT45A7P0DMV0 189 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 CNTFRP26992 372 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 TMBIM6P55061 237 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 VBP1P61758 197 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 NCS1P62166 190 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 CTF1Q16619 201 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 C8orf86Q6ZUL3 223 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 REC114Q7Z4M0 266 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 ZNF695Q8IW36 515 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 WFDC9Q8NEX5 89 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 RCC1LQ96I51 464 aaKnown RBP16.26■□□□□ 0.19
HSPG2-205ENST00000427897 RITA1Q96K30 269 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 GINS4Q9BRT9 223 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 PARP11Q9NR21 331 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 KCNK7Q9Y2U2 307 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 WASHC3Q9Y3C0 194 aa16.26■□□□□ 0.19
HSPG2-205ENST00000427897 RAB27BO00194 218 aa16.25■□□□□ 0.19
HSPG2-205ENST00000427897 DUS4LO95620 317 aaKnown RBP16.25■□□□□ 0.19
HSPG2-205ENST00000427897 APOA2P02652 100 aa16.25■□□□□ 0.19
HSPG2-205ENST00000427897 CLEC2LP0C7M8 214 aa16.25■□□□□ 0.19
HSPG2-205ENST00000427897 SCAND1P57086 179 aa16.25■□□□□ 0.19
HSPG2-205ENST00000427897 FOXE3Q13461 319 aa16.25■□□□□ 0.19
HSPG2-205ENST00000427897 C5orf64Q2M2E5 130 aa16.25■□□□□ 0.19
HSPG2-205ENST00000427897 CDNFQ49AH0 187 aa16.25■□□□□ 0.19
HSPG2-205ENST00000427897 DRAXINQ8NBI3 349 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-205ENST00000427897 ABHD5Q8WTS1 349 aa16.25■□□□□ 0.19
HSPG2-205ENST00000427897 NAA50Q9GZZ1 169 aaKnown RBP16.25■□□□□ 0.19
HSPG2-205ENST00000427897 MFNGO00587 321 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 SCGNO76038 276 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 PRB2P02812 416 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-205ENST00000427897 RPLP1P05386 114 aaKnown RBP16.24■□□□□ 0.19
HSPG2-205ENST00000427897 ELANEP08246 267 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 GSTT2P0CG29 244 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 GSTT2BP0CG30 244 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 TGFBR1P36897 503 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 RPS19P39019 145 aaKnown RBP16.24■□□□□ 0.19
HSPG2-205ENST00000427897 RAB25P57735 213 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 IGSF11Q5DX21 431 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 MAFIPQ8WZ33 124 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 DPF1Q92782 380 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 AGMATQ9BSE5 352 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 OR51J1Q9H342 316 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 NECAP2Q9NVZ3 263 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 ZNF230Q9UIE0 474 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-205ENST00000427897 WSB1Q9Y6I7 421 aa16.24■□□□□ 0.19
HSPG2-205ENST00000427897 IGKV1-6A0A0C4DH72 117 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 H0YJW9 148 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 M0R1X1 148 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 RBBP9O75884 186 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 HLA-DRB1P01911 266 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 IGF1P05019 195 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 OR8U9P0C7N5 309 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 MYCNOSP40205 109 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 THBS3P49746 956 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 RPS16P62249 146 aaKnown RBP16.23■□□□□ 0.19
HSPG2-205ENST00000427897 CBX3Q13185 183 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 IDNKQ5T6J7 187 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 KPRPQ5T749 579 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-205ENST00000427897 C18orf65Q6ZTR6 163 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 NPBQ8NG41 125 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 OR8U1Q8NH10 309 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 SLC25A46Q96AG3 418 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 ST6GALNAC5Q9BVH7 336 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 GPR61Q9BZJ8 451 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 CMYA5Q8N3K9 4069 aa16.23■□□□□ 0.19
HSPG2-205ENST00000427897 RRHO14718 337 aa16.22■□□□□ 0.19
HSPG2-205ENST00000427897 ATP6V0E1O15342 81 aa16.22■□□□□ 0.19
HSPG2-205ENST00000427897 SNRPBP14678 240 aaKnown RBP16.22■□□□□ 0.19
HSPG2-205ENST00000427897 FOXB2Q5VYV0 432 aa16.22■□□□□ 0.19
HSPG2-205ENST00000427897 LCNL1Q6ZST4 164 aa16.22■□□□□ 0.19
HSPG2-205ENST00000427897 TSNAXQ99598 290 aaKnown RBP16.22■□□□□ 0.19
HSPG2-205ENST00000427897 RNF5Q99942 180 aa16.22■□□□□ 0.19
HSPG2-205ENST00000427897 OR2D2Q9H210 308 aa16.22■□□□□ 0.19
HSPG2-205ENST00000427897 FBXL15Q9H469 300 aa16.22■□□□□ 0.19
HSPG2-205ENST00000427897 ETV7Q9Y603 341 aa16.22■□□□□ 0.19
HSPG2-205ENST00000427897 TRAV41A0A0B4J266 112 aa16.21■□□□□ 0.19
HSPG2-205ENST00000427897 NDUFA3O95167 84 aa16.21■□□□□ 0.19
HSPG2-205ENST00000427897 IGHG4P01861 327 aa16.21■□□□□ 0.19
HSPG2-205ENST00000427897 PITPNAQ00169 270 aa16.21■□□□□ 0.19
HSPG2-205ENST00000427897 MRPL41Q8IXM3 137 aaKnown RBP16.21■□□□□ 0.19
HSPG2-205ENST00000427897 LINC00482Q8N8I6 264 aa16.21■□□□□ 0.19
HSPG2-205ENST00000427897 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-205ENST00000427897 OR5AN1Q8NGI8 311 aa16.21■□□□□ 0.19
HSPG2-205ENST00000427897 FLYWCH2Q96CP2 140 aaKnown RBP16.21■□□□□ 0.19
HSPG2-205ENST00000427897 KCTD12Q96CX2 325 aaKnown RBP16.21■□□□□ 0.19
HSPG2-205ENST00000427897 CLCC1Q96S66 551 aa16.21■□□□□ 0.19
HSPG2-205ENST00000427897 MCRIP2Q9BUT9 160 aaKnown RBP16.21■□□□□ 0.19
HSPG2-205ENST00000427897 DCSTAMPQ9H295 470 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms