RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CCDC190Q86UF4 302 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 DRAXINQ8NBI3 349 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-202ENST00000422544 FAM216AQ8WUB2 273 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 CFHR4Q92496 578 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 S1PR3Q99500 378 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 MRPL20Q9BYC9 149 aaKnown RBP7.44□□□□□ -1.22
PDGFC-202ENST00000422544 OR2D2Q9H210 308 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 GHITMQ9H3K2 345 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 EHFQ9NZC4 300 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 RABL2AQ9UBK7 228 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-202ENST00000422544 RABL2BQ9UNT1 228 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 TCF19Q9Y242 345 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 OR2W1Q9Y3N9 320 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 V9GYH0 126 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
PDGFC-202ENST00000422544 RYR3Q15413 4870 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 IGKV1D-13A0A0B4J2D9 117 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 FAM90A9PA6NNJ1 464 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 M0QYG6 137 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 M0R1X1 148 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 TUSC2O75896 110 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 IGKV1D-33P01593 117 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 IGKV1-33P01594 117 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 CT45A6P0DMU7 189 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 CT45A5P0DMU8 189 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 CT45A7P0DMV0 189 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 IGKV1-13P0DP09 117 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 LINC00205P59089 165 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 DYRK1AQ13627 763 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 HES1Q14469 280 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 SPANXN2Q5MJ10 180 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 DHRS11Q6UWP2 260 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 GLDNQ6ZMI3 551 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-202ENST00000422544 THNSL2Q86YJ6 484 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-202ENST00000422544 ZFAND2BQ8WV99 257 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 SMIM4Q8WVI0 70 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 GIMAP1Q8WWP7 306 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 NABP2Q9BQ15 211 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 SDHAF2Q9NX18 166 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 GAB2Q9UQC2 676 aa7.43□□□□□ -1.22
PDGFC-202ENST00000422544 VWFP04275 2813 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 TXNL1O43396 289 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 GSTZ1O43708 216 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 CHST1O43916 411 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 PPYP01298 95 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 CD3DP04234 171 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 CRYBA1P05813 215 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 CD1BP29016 333 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 ETV6P41212 452 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 TAS2R19P59542 299 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 FXYD4P59646 89 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 ACTBP60709 375 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 TSPAN5P62079 268 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 ACTG1P63261 375 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 LSAMPQ13449 338 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 HABP2Q14520 560 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF79Q15937 498 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF660Q6AZW8 331 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 FAM71F2Q6NXP2 309 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 TMEM229BQ8NBD8 167 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 OR6F1Q8NGZ6 308 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 SECTM1Q8WVN6 248 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 C5orf30Q96GV9 206 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 EAF1Q96JC9 268 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF2Q9BSG1 426 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 THAP7Q9BT49 309 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 TINAGL1Q9GZM7 467 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
PDGFC-202ENST00000422544 RBMX2Q9Y388 322 aaKnown RBP7.42□□□□□ -1.22
PDGFC-202ENST00000422544 H0YJW9 148 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 MOSP00540 346 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 IGLV2-14P01704 120 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 CD74P04233 296 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 IFNA6P05013 189 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 TMEM11P17152 192 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 PTBP1P26599 531 aaKnown RBP eCLIP7.41□□□□□ -1.223e-6■■■■□ 25.7
PDGFC-202ENST00000422544 HERV-K104P61576 105 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 RELBQ01201 579 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 SSBP1Q04837 148 aaKnown RBP7.41□□□□□ -1.22
PDGFC-202ENST00000422544 EBI3Q14213 229 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 ACTBL2Q562R1 376 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 RNASE10Q5GAN6 216 aaKnown RBP7.41□□□□□ -1.22
PDGFC-202ENST00000422544 VAX1Q5SQQ9 334 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 DHRS7BQ6IAN0 325 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-202ENST00000422544 STEAP1BQ6NZ63 245 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 LIAT1Q6ZQX7 453 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 Q8N402 240 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF645Q8N7E2 425 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF383Q8NA42 475 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 OR4D10Q8NGI6 311 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 OR2T10Q8NGZ9 312 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 TMEM158Q8WZ71 300 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 RITA1Q96K30 269 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 RBM14Q96PK6 669 aaKnown RBP7.41□□□□□ -1.22
PDGFC-202ENST00000422544 SLC25A33Q9BSK2 321 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 C19orf24Q9BVV8 132 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 SRRQ9GZT4 340 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 SLC5A7Q9GZV3 580 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms