RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 TMEM33P57088 247 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LINC00313P59037 77 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZNF816Q0VGE8 651 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C2orf83Q53S99 150 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LPCAT3Q6P1A2 487 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 UNQ9165/PRO28630Q6UXU0 137 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GLT6D1Q7Z4J2 308 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TMEM144Q7Z5S9 345 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LRP11Q86VZ4 500 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZNF676Q8N7Q3 588 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZFP62Q8NB50 900 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR4X1Q8NH49 305 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MCFD2Q8NI22 146 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LHFPL5Q8TAF8 219 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 RTN4IP1Q8WWV3 396 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 RMI2Q96E14 147 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SLC25A44Q96H78 314 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PLA2G12AQ9BZM1 189 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LINC00574Q9H8X3 128 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZNF286AQ9HBT8 521 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MRPL40Q9NQ50 206 aaKnown RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 KCNIP2Q9NS61 270 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 NYAP2Q9P242 653 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 DHCR7Q9UBM7 475 aaKnown RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MRPS16Q9Y3D3 137 aaKnown RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SCN4AP35499 1836 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GOLGA6L4A6NEF3 574 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR5K4A6NMS3 321 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 H0YJX3 145 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 H3BQV1 296 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GSTZ1O43708 216 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IL4P05112 153 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CD5P06127 495 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GUSBP08236 651 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 HIST1H1TP22492 207 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TGFBR1P36897 503 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PSG4Q00888 419 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CAV1Q03135 178 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FABP9Q0Z7S8 132 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FUT5Q11128 374 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZFP2Q6ZN57 461 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SMIM15Q7Z3B0 74 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 BAP18Q8IXM2 172 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C20orf196Q8IYI0 205 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TMEM105Q8N8V8 129 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 APCDD1LQ8NCL9 501 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FRZBQ92765 325 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CPNE2Q96FN4 548 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ULBP3Q9BZM4 244 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 VCXQ9H320 206 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TRABDQ9H4I3 376 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 VPREB3Q9UKI3 123 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ANAPC10Q9UM13 185 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 HHLA2Q9UM44 414 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PXMP4Q9Y6I8 212 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TUBGCP6Q96RT7 1819 aa2.35□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CHD5Q8TDI0 1954 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TMED7-TICAM2A0A0A6YYA0 188 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGKV1-12A0A0C4DH73 117 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGHV1-69-2A0A0G2JMI3 117 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 KLRC4O43908 158 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGKV1D-12P01611 117 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGHMP01871 453 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGLV7-43P04211 117 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 RPSAP08865 295 aaKnown RBP2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CD7P09564 240 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MUC1P15941 1255 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ATP6V0CP27449 155 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 AKR1C2P52895 323 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FGF12P61328 243 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 HOXC5Q00444 222 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IAH1Q2TAA2 248 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TEX36Q5VZQ5 186 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TRIQKQ629K1 86 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 DAZ4Q86SG3 579 aaKnown RBP2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SGPP2Q8IWX5 399 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C3orf22Q8N5N4 141 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR2D3Q8NGH3 330 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR2T27Q8NH04 317 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR5P3Q8WZ94 311 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 RBPMSQ93062 196 aaKnown RBP2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PPP1R2P1Q96PQ5 205 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TBX5Q99593 518 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TSSK6Q9BXA6 273 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GABARAPL1Q9H0R8 117 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR2D2Q9H210 308 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ENY2Q9NPA8 101 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 DAZ1Q9NQZ3 744 aaKnown RBP2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZNF586Q9NXT0 402 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IDI2-AS1Q9NZ38 188 aa2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MRPL27Q9P0M9 148 aaKnown RBP2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FAM32AQ9Y421 112 aaKnown RBP2.34□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ADAMTS9Q9P2N4 1935 aa2.34□□□□□ -2.04
RNU6-1249P-201ENST00000363237 WRNQ14191 1432 aaPredicted RBP eCLIP2.34□□□□□ -2.04
RNU6-1249P-201ENST00000363237 ZNF318Q5VUA4 2279 aa2.33□□□□□ -2.04
RNU6-1249P-201ENST00000363237 OTOFQ9HC10 1997 aa2.33□□□□□ -2.04
RNU6-1249P-201ENST00000363237 OR4C46A6NHA9 309 aa2.33□□□□□ -2.04
RNU6-1249P-201ENST00000363237 FAM159BA6NKW6 160 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms