RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 LRRC3CA6NJW4 275 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 SSTR5P35346 364 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 SLC35B1P78383 322 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 DRAM1Q8N682 238 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 LURAP1Q96LR2 239 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 HIPK2Q9H2X6 1198 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 RNF122Q9H9V4 155 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 INTS1Q8N201 2190 aaKnown RBP13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 A0A1B0GU03 582 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 CA11O75493 328 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 ZNF83P51522 516 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 ZNF90Q03938 601 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 ZNF385CQ66K41 422 aaPredicted RBP13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 OR10A7Q8NGE5 316 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 MPC1Q9Y5U8 109 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 NDUFS6O75380 124 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 S1PR2O95136 353 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 Q6ZRM9 215 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 C11orf94C9JXX5 98 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 UCP1P25874 307 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 CDC34P49427 236 aaPredicted RBP13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 TCL1AP56279 114 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 HERPUD1Q15011 391 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 PLPPR1Q8TBJ4 325 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 LRRC29Q8WV35 223 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 PROK2Q9HC23 129 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 ZMAT5Q9UDW3 170 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 OR7C2O60412 319 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 RIPPLY2Q5TAB7 128 aa13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 REPIN1Q9BWE0 567 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-201ENST00000263666 PIGBOS1A0A0B4J2F0 54 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 PRRG2O14669 202 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 OTX1P32242 354 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 SPTBN5Q9NRC6 3674 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 PGPEP1LA6NFU8 196 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 HSPB1P04792 205 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 NDUFB7P17568 137 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 UCP3P55916 312 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 OR5D13Q8NGL4 314 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 ZDHHC11Q9H8X9 412 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 RAMP3O60896 148 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 GLIPR1P48060 266 aa13.74□□□□□ -0.21
PDZRN3-201ENST00000263666 TRAV24A0A0B4J272 114 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 CEACAM18A8MTB9 384 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 M0R1B8 84 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BKO60814 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BJP06899 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BOP23527 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BBP33778 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 CDX1P47902 265 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BDP58876 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BCP62807 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST2H2BEQ16778 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 MED12LQ86YW9 2145 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 CLDND2Q8NHS1 167 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BHQ93079 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BNQ99877 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HIST1H2BMQ99879 126 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 FRYLO94915 3013 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 HBZP02008 142 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 MEF2BQ02080 365 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 RAB31Q13636 194 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 CDPF1Q6NVV7 123 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 MRGPRGQ86SM5 289 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 H1FOOQ8IZA3 346 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 RAB24Q969Q5 203 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 F6UZH7 168 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 DNPH1O43598 174 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 CD59P13987 128 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 NTF3P20783 257 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 RPL29P47914 159 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 ACOT6Q3I5F7 207 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 OR51G1Q8NGK1 321 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 ELOVL1Q9BW60 279 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 PRDM14Q9GZV8 571 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 TRAPPC1Q9Y5R8 145 aa13.73□□□□□ -0.21
PDZRN3-201ENST00000263666 A0A1B0GV90 55 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 NDUFB4O95168 129 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 LYL1P12980 280 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 TFF3Q07654 80 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 IL15RAQ13261 267 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 ELOBQ15370 118 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 PPP1R35Q8TAP8 253 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 NAT8Q9UHE5 227 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 WDFY4Q6ZS81 3184 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 IGKV1-6A0A0C4DH72 117 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 FBXW9Q5XUX1 488 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 OR2T10Q8NGZ9 312 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 ZFP36L1Q07352 338 aaKnown RBP13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 LYG1Q8N1E2 194 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 C1QTNF5Q9BXJ0 243 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 ZNF503-AS2A6NEH8 195 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 PYY3Q5JQD4 70 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 GCSAMLQ5JQS6 135 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 HEPN1Q6WQI6 88 aa13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 H1FXQ92522 213 aaKnown RBP13.72□□□□□ -0.21
PDZRN3-201ENST00000263666 NEIL1Q96FI4 390 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms