RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 CABLES2Q9BTV7 478 aa13.07□□□□□ -0.32
DNMT1-229ENST00000593049 FUNDC2Q9BWH2 189 aa13.07□□□□□ -0.32
DNMT1-229ENST00000593049 MRPS26Q9BYN8 205 aaKnown RBP13.07□□□□□ -0.32
DNMT1-229ENST00000593049 DCSTAMPQ9H295 470 aa13.07□□□□□ -0.32
DNMT1-229ENST00000593049 DIABLOQ9NR28 239 aa13.07□□□□□ -0.32
DNMT1-229ENST00000593049 NCBP2LA6PVI3 153 aaKnown RBP13.06□□□□□ -0.32
DNMT1-229ENST00000593049 ST8SIA5O15466 376 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 GNG2P59768 71 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 LSM3P62310 102 aaKnown RBP13.06□□□□□ -0.32
DNMT1-229ENST00000593049 ZNF260Q3ZCT1 412 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 C9orf152Q5JTZ5 239 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 TREML4Q6UXN2 200 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 CENPVQ7Z7K6 275 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-229ENST00000593049 KCTD12Q96CX2 325 aaKnown RBP13.06□□□□□ -0.32
DNMT1-229ENST00000593049 NABP2Q9BQ15 211 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 AGMATQ9BSE5 352 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 C11orf54Q9H0W9 315 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-229ENST00000593049 LIN7CQ9NUP9 197 aaKnown RBP13.06□□□□□ -0.32
DNMT1-229ENST00000593049 OR1A1Q9P1Q5 309 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 ZNF221Q9UK13 617 aa13.06□□□□□ -0.32
DNMT1-229ENST00000593049 IGKV1-6A0A0C4DH72 117 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 BET1O15155 118 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 CTXN2P0C2S0 81 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 GSTT2P0CG29 244 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 GSTT2BP0CG30 244 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 SMIM18P0DKX4 95 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 RPS19P39019 145 aaKnown RBP13.05□□□□□ -0.32
DNMT1-229ENST00000593049 OR3A3P47888 321 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-229ENST00000593049 OR5H6Q8NGV6 325 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 WIPF2Q8TF74 440 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-229ENST00000593049 SLC25A38Q96DW6 304 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 GINS4Q9BRT9 223 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 MRPL20Q9BYC9 149 aaKnown RBP13.05□□□□□ -0.32
DNMT1-229ENST00000593049 RDH8Q9NYR8 311 aa13.05□□□□□ -0.32
DNMT1-229ENST00000593049 TRBV6-7A0A0A0MS04 114 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 TMEM235A6NFC5 223 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 OR5H14A6NHG9 310 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 ZNF736B4DX44 427 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-229ENST00000593049 CSF1P09603 554 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 MC5RP33032 325 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 TMEM95Q3KNT9 176 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 Q8N9W7 124 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 SLC25A46Q96AG3 418 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 RASL11BQ9BPW5 248 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 ABCG5Q9H222 651 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 MMP27Q9H306 513 aa13.04□□□□□ -0.32
DNMT1-229ENST00000593049 ZNF230Q9UIE0 474 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-229ENST00000593049 TRAV18A0A075B6X5 111 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 KCNAB3O43448 404 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 IGHG2P01859 326 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 TGFBR1P36897 503 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 GPR12P47775 334 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 IGSF11Q5DX21 431 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 UBE2NLQ5JXB2 153 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 NDUFA11Q86Y39 141 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 ANKRD13BQ86YJ7 626 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 FOXRED2Q8IWF2 684 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 OR5AU1Q8NGC0 362 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 OR4X2Q8NGF9 303 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 CHPT1Q8WUD6 406 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 MAFIPQ8WZ33 124 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 S100A16Q96FQ6 103 aaKnown RBP13.03□□□□□ -0.32
DNMT1-229ENST00000593049 ABHD14BQ96IU4 210 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 ZNF251Q9BRH9 671 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 ST6GALNAC5Q9BVH7 336 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 PARP12Q9H0J9 701 aaKnown RBP13.03□□□□□ -0.32
DNMT1-229ENST00000593049 PLSCR3Q9NRY6 295 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 GAB2Q9UQC2 676 aa13.03□□□□□ -0.32
DNMT1-229ENST00000593049 RBBP9O75884 186 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 OPN1MWP04001 364 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 OPN1MW2P0DN77 364 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 OPN1MW3P0DN78 364 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 MMDQ15546 238 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 RPL39P5Q59GN2 51 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 CNIH2Q6PI25 160 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 C11orf44Q8N8P7 122 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 NUDCD2Q8WVJ2 157 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 GON7Q9BXV9 100 aa13.02□□□□□ -0.33
DNMT1-229ENST00000593049 ELF5Q9UKW6 265 aaPredicted RBP13.02□□□□□ -0.33
DNMT1-229ENST00000593049 RBM7Q9Y580 266 aaKnown RBP13.02□□□□□ -0.33
DNMT1-229ENST00000593049 SH2D7A6NKC9 451 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-229ENST00000593049 XRCC3O43542 346 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 GABARAPO95166 117 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 TFAP2AP05549 437 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 CT45A6P0DMU7 189 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 CT45A5P0DMU8 189 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 CT45A7P0DMV0 189 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 CD28P10747 220 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 CBX5P45973 191 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 ACTBP60709 375 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 VBP1P61758 197 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 NCS1P62166 190 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 SLC35B1P78383 322 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 FAM131AQ6UXB0 335 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 GPR141Q7Z602 305 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 FAM71E2Q8N5Q1 922 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 ACOT12Q8WYK0 555 aa13.01□□□□□ -0.33
DNMT1-229ENST00000593049 CMTM3Q96MX0 182 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms