RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 FADS2O95864 444 aaKnown RBP3.02□□□□□ -1.93
VMP1-205ENST00000587470 LALBAP00709 142 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 CST4P01036 141 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 LHBP01229 141 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 TACSTD2P09758 323 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 HNF1AP20823 631 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 CCL1P22362 96 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 DCKP27707 260 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 HSD11B1P28845 292 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 FCGR2CP31995 323 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 CFHR2P36980 270 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 TMEM33P57088 247 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 SLC35A2P78381 396 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 TNFAIP6P98066 277 aaPredicted RBP3.02□□□□□ -1.93
VMP1-205ENST00000587470 IL5RAQ01344 420 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 LOXL1Q08397 574 aaPredicted RBP3.02□□□□□ -1.93
VMP1-205ENST00000587470 ST3GAL4Q11206 333 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 RAB40BQ12829 278 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 MPPED2Q15777 294 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 TATDN3Q17R31 274 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 LINC01620Q4KN68 170 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 TP53I3Q53FA7 332 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 TMEM42Q69YG0 159 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 XAF1Q6GPH4 301 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 CLEC2AQ6UVW9 174 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 MRPL21Q7Z2W9 205 aaKnown RBP3.02□□□□□ -1.93
VMP1-205ENST00000587470 RDH10Q8IZV5 341 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 C8orf59Q8N0T1 100 aaPredicted RBP3.02□□□□□ -1.93
VMP1-205ENST00000587470 SYS1Q8N2H4 156 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 C11orf42Q8N5U0 333 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 BHLHE23Q8NDY6 225 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 ZNF555Q8NEP9 628 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 OR2Z1Q8NG97 314 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 OR5AU1Q8NGC0 362 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 OR10AD1Q8NGE0 317 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 OR6F1Q8NGZ6 308 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 OR10AC1Q8NH08 325 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 OR51E1Q8TCB6 317 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 ITLN1Q8WWA0 313 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 RDH5Q92781 318 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 ITFG2Q969R8 447 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 REEP6Q96HR9 211 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 OR2V2Q96R30 315 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 ANKRD60Q9BZ19 345 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 BPESC1Q9GZL8 116 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 DUSP21Q9H596 190 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 SP140LQ9H930 580 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 GPR84Q9NQS5 396 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 ZNF275Q9NSD4 429 aaPredicted RBP3.02□□□□□ -1.93
VMP1-205ENST00000587470 TMEM100Q9NV29 134 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 PAK1IP1Q9NWT1 392 aaPredicted RBP3.02□□□□□ -1.93
VMP1-205ENST00000587470 MBD2Q9UBB5 411 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 ZNF391Q9UJN7 358 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 OR52A1Q9UKL2 312 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 IKZF2Q9UKS7 526 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 RPL36Q9Y3U8 105 aaKnown RBP3.02□□□□□ -1.93
VMP1-205ENST00000587470 N6AMT1Q9Y5N5 214 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 V9GYS6 101 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 RYR3Q15413 4870 aa3.02□□□□□ -1.93
VMP1-205ENST00000587470 A0A0A6YYD4 124 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 IGHV1-69-2A0A0G2JMI3 117 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 IGHV3-64DA0A0J9YX35 117 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 FAM168BA1KXE4 195 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 LRP5LA4QPB2 252 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 EFCAB10A6NFE3 127 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 GGT3PA6NGU5 568 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 SNTNA6NMZ2 147 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 DHRS7CA6NNS2 312 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 ZNF850A8MQ14 1090 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 PPIAL4DF5H284 164 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.01□□□□□ -1.93
VMP1-205ENST00000587470 J3QLW9 94 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 DENRO43583 198 aaKnown RBP3.01□□□□□ -1.93
VMP1-205ENST00000587470 GMDSO60547 372 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 FCN3O75636 299 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 DHRS3O75911 302 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 RPP14O95059 124 aaKnown RBP3.01□□□□□ -1.93
VMP1-205ENST00000587470 ISG15P05161 165 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 CDK1P06493 297 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 HTR1AP08908 422 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 CSF3P09919 207 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 CCDC159P0C7I6 412 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 PIPP12273 146 aaPredicted RBP3.01□□□□□ -1.93
VMP1-205ENST00000587470 SLC25A16P16260 332 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 ZNF19P17023 458 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 USF1P22415 310 aaPredicted RBP3.01□□□□□ -1.93
VMP1-205ENST00000587470 CFL1P23528 166 aaKnown RBP3.01□□□□□ -1.93
VMP1-205ENST00000587470 CRHBPP24387 322 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 IL2RGP31785 369 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 TAGLN2P37802 199 aaKnown RBP3.01□□□□□ -1.93
VMP1-205ENST00000587470 VHLP40337 213 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 CD200P41217 278 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 TGM4P49221 684 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 PPT1P50897 306 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 GTF2A1P52655 376 aaPredicted RBP3.01□□□□□ -1.93
VMP1-205ENST00000587470 RPS11P62280 158 aaKnown RBP eCLIP3.01□□□□□ -1.93
VMP1-205ENST00000587470 ACTG1P63261 375 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 ACTC1P68032 377 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 ACTA1P68133 377 aa3.01□□□□□ -1.93
VMP1-205ENST00000587470 ZNF154Q13106 437 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms