RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 ENSAO43768 121 aaKnown RBP-0.28□□□□□ -2.45
CASC4-211ENST00000561305 BPGMP07738 259 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 CRYBB3P26998 211 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 EMX1Q04741 257 aaPredicted RBP-0.28□□□□□ -2.45
CASC4-211ENST00000561305 C7orf65Q6ZTY9 151 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 ZNF439Q8NDP4 499 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 OR51L1Q8NGJ5 315 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 OR6K2Q8NGY2 324 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 OR11H2Q8NH07 326 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 OR2AE1Q8NHA4 323 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 ZNF707Q96C28 371 aaPredicted RBP-0.28□□□□□ -2.45
CASC4-211ENST00000561305 DOHHQ9BU89 302 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 MED18Q9BUE0 208 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 MAP1LC3CQ9BXW4 147 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 CHRAC1Q9NRG0 131 aa-0.28□□□□□ -2.45
CASC4-211ENST00000561305 A0A1B0GTQ1 180 aa-0.29□□□□□ -2.46
CASC4-211ENST00000561305 AKR1C4P17516 323 aa-0.29□□□□□ -2.46
CASC4-211ENST00000561305 RPL27AP46776 148 aaKnown RBP-0.29□□□□□ -2.46
CASC4-211ENST00000561305 HBMQ6B0K9 141 aa-0.29□□□□□ -2.46
CASC4-211ENST00000561305 KTN1-AS1Q86SY8 53 aa-0.29□□□□□ -2.46
CASC4-211ENST00000561305 RGCCQ9H4X1 137 aa-0.29□□□□□ -2.46
CASC4-211ENST00000561305 SERPINA7P05543 415 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 CDK2P24941 298 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 BCAP31P51572 246 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 FAM3AP98173 230 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 XRCC4Q13426 336 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 DYNAPQ8N1N2 210 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 ACBD4Q8NC06 268 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 CLDND2Q8NHS1 167 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 MRPL57Q9BQC6 102 aaKnown RBP-0.3□□□□□ -2.46
CASC4-211ENST00000561305 SYT4Q9H2B2 425 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 ANKHQ9HCJ1 492 aa-0.3□□□□□ -2.46
CASC4-211ENST00000561305 CPAMD8Q8IZJ3 1885 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 RAB3GAP2Q9H2M9 1393 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 RFXANKO14593 260 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 CRYBA1P05813 215 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 CD7P09564 240 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 SRMP19623 302 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 UGT2B10P36537 528 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 FAHD1Q6P587 224 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 TOP1MTQ969P6 601 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 TRNT1Q96Q11 434 aaKnown RBP-0.31□□□□□ -2.46
CASC4-211ENST00000561305 C10orf95Q9H7T3 257 aa-0.31□□□□□ -2.46
CASC4-211ENST00000561305 ABCB11O95342 1321 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 CDK14O94921 469 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 GIMD1P0DJR0 217 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 RPA3P35244 121 aaPredicted RBP-0.32□□□□□ -2.46
CASC4-211ENST00000561305 PEX19P40855 299 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 ELOBQ15370 118 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 TRIP13Q15645 432 aaPredicted RBP-0.32□□□□□ -2.46
CASC4-211ENST00000561305 ARHGAP11BQ3KRB8 267 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 LINC00523Q86TU6 105 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 SMCR5Q8TEV8 140 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 CIB1Q99828 191 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 COPS4Q9BT78 406 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 OR51E2Q9H255 320 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 SNURFQ9Y675 71 aa-0.32□□□□□ -2.46
CASC4-211ENST00000561305 ZNF462Q96JM2 2506 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 ALPK2Q86TB3 2170 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.33□□□□□ -2.46
CASC4-211ENST00000561305 EML5Q05BV3 1969 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 EXPH5Q8NEV8 1989 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 HMSDA8MTL9 139 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 CDIPTO14735 213 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 GADD45AP24522 165 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 PSMB3P49720 205 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 TRMT12Q53H54 448 aaKnown RBP-0.33□□□□□ -2.46
CASC4-211ENST00000561305 SPATA31B1PQ5VZV4 182 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 DRAM2Q6UX65 266 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.33□□□□□ -2.46
CASC4-211ENST00000561305 SLC36A1Q7Z2H8 476 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 SLC7A6Q92536 515 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 PGLYRP3Q96LB9 341 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 DNAJC12Q9UKB3 198 aa-0.33□□□□□ -2.46
CASC4-211ENST00000561305 RRP15Q9Y3B9 282 aaKnown RBP-0.33□□□□□ -2.46
CASC4-211ENST00000561305 MACF1Q9UPN3 7388 aaKnown RBP-0.34□□□□□ -2.46
CASC4-211ENST00000561305 POLR3GO15318 223 aaPredicted RBP-0.34□□□□□ -2.46
CASC4-211ENST00000561305 SHOX2O60902 331 aaPredicted RBP-0.34□□□□□ -2.46
CASC4-211ENST00000561305 ORM2P19652 201 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 OR1E2P47887 323 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 TAS2R30P59541 319 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 TSPAN5P62079 268 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 TRAM1Q15629 374 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 Q6ZT83 130 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 DCXRQ7Z4W1 244 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 TMCO2Q7Z6W1 182 aaPredicted RBP-0.34□□□□□ -2.46
CASC4-211ENST00000561305 DOLPP1Q86YN1 238 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 NAV1Q8NEY1 1877 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 OR51T1Q8NGJ9 327 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 HBEGFQ99075 208 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 REG4Q9BYZ8 158 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 TAS2R13Q9NYV9 303 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 TMEM216Q9P0N5 145 aa-0.34□□□□□ -2.46
CASC4-211ENST00000561305 MED12LQ86YW9 2145 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 IGKV1D-42A0A075B6H8 117 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 MGAT4DA6NG13 374 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 NDUFB2O95178 105 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 NPYP01303 97 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 IGLV3-27P01718 113 aa-0.35□□□□□ -2.47
CASC4-211ENST00000561305 STAG3L3P0CL85 134 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms