RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ABCG5Q9H222 651 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 LIN7CQ9NUP9 197 aaKnown RBP16.2■□□□□ 0.18
VTI1B-205ENST00000555543 DAPK2Q9UIK4 370 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 PSMB11A5LHX3 300 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 SERPINE3A8MV23 424 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 TRDCB7Z8K6 153 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 SNRPBP14678 240 aaKnown RBP16.19■□□□□ 0.18
VTI1B-205ENST00000555543 CEACAM6P40199 344 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 GPR12P47775 334 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 DEFA6Q01524 100 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 MXD1Q05195 221 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 SFXN4Q6P4A7 337 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 OR4X2Q8NGF9 303 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 MAFIPQ8WZ33 124 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 ABHD14BQ96IU4 210 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 RITA1Q96K30 269 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 CENPOQ9BU64 300 aa16.19■□□□□ 0.18
VTI1B-205ENST00000555543 C11orf54Q9H0W9 315 aaPredicted RBP16.19■□□□□ 0.18
VTI1B-205ENST00000555543 ELF5Q9UKW6 265 aaPredicted RBP16.19■□□□□ 0.18
VTI1B-205ENST00000555543 TCRBV4S1A1TA0A5B7 111 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 ITGB1BP1O14713 200 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 HSPA12AO43301 675 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 ZBTB25P24278 435 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 FAM71F2Q6NXP2 309 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 C1QL4Q86Z23 238 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 OR8H1Q8NGG4 311 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 LGALS14Q8TCE9 139 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 HSPB9Q9BQS6 159 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 ATG5Q9H1Y0 275 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 PIPOXQ9P0Z9 390 aa16.18■□□□□ 0.18
VTI1B-205ENST00000555543 ZNF230Q9UIE0 474 aaPredicted RBP16.18■□□□□ 0.18
VTI1B-205ENST00000555543 METTL21EPA6NDL7 271 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 RAB29O14966 203 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 FABP7O15540 132 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 CNTFRP26992 372 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 MRPS15P82914 257 aaKnown RBP16.17■□□□□ 0.18
VTI1B-205ENST00000555543 MMDQ15546 238 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 IGSF11Q5DX21 431 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 FAM131AQ6UXB0 335 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 STPG2Q8N412 459 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 OR4F17Q8NGA8 305 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 CHPT1Q8WUD6 406 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 OR4F4Q96R69 305 aa16.17■□□□□ 0.18
VTI1B-205ENST00000555543 TSSC4Q9Y5U2 329 aaPredicted RBP16.17■□□□□ 0.18
VTI1B-205ENST00000555543 TNFAIP8O95379 198 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 CT45A6P0DMU7 189 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 CT45A5P0DMU8 189 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 CT45A7P0DMV0 189 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 ACTBP60709 375 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 KHDC1LQ5JSQ8 128 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 GLDNQ6ZMI3 551 aaPredicted RBP16.16■□□□□ 0.18
VTI1B-205ENST00000555543 TSPAN14Q8NG11 270 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 OR4A4PQ8NGN8 299 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 EDARADDQ8WWZ3 215 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 RASL11BQ9BPW5 248 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 CABLES2Q9BTV7 478 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 RDH8Q9NYR8 311 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 RNF150Q9ULK6 438 aa16.16■□□□□ 0.18
VTI1B-205ENST00000555543 PRKDCP78527 4128 aaKnown RBP16.16■□□□□ 0.18
VTI1B-205ENST00000555543 PLXNB1O43157 2135 aa16.15■□□□□ 0.18
VTI1B-205ENST00000555543 G3V4G9 280 aa16.15■□□□□ 0.18
VTI1B-205ENST00000555543 PROP1O75360 226 aa16.15■□□□□ 0.18
VTI1B-205ENST00000555543 GSTT2P0CG29 244 aa16.15■□□□□ 0.18
VTI1B-205ENST00000555543 GSTT2BP0CG30 244 aa16.15■□□□□ 0.18
VTI1B-205ENST00000555543 TGFBR1P36897 503 aa16.15■□□□□ 0.18
VTI1B-205ENST00000555543 FOXRED2Q8IWF2 684 aa16.15■□□□□ 0.18
VTI1B-205ENST00000555543 DNAH3Q8TD57 4116 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 IGKV1D-8A0A087WSZ0 117 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 A0A087WXM4 84 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 AP4M1O00189 453 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 BET1O15155 118 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 ARFRP1Q13795 201 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 KIR2DS1Q14954 304 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 CDNFQ49AH0 187 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 OR5H6Q8NGV6 325 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 YIPF6Q96EC8 236 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 TOLLIPQ9H0E2 274 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.14■□□□□ 0.17
VTI1B-205ENST00000555543 NOTCH3Q9UM47 2321 aa16.14■□□□□ 0.17
VTI1B-205ENST00000555543 H0YJW9 148 aa16.13■□□□□ 0.17
VTI1B-205ENST00000555543 SOX6P35712 828 aa16.13■□□□□ 0.17
VTI1B-205ENST00000555543 DRAXINQ8NBI3 349 aaPredicted RBP16.13■□□□□ 0.17
VTI1B-205ENST00000555543 SLC25A38Q96DW6 304 aa16.13■□□□□ 0.17
VTI1B-205ENST00000555543 GHITMQ9H3K2 345 aa16.13■□□□□ 0.17
VTI1B-205ENST00000555543 RHBDL2Q9NX52 303 aa16.13■□□□□ 0.17
VTI1B-205ENST00000555543 TRBV6-7A0A0A0MS04 114 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 TMEM235A6NFC5 223 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 NBR2O15453 112 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 PF4V1P10720 104 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 SERPINB10P48595 397 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 LINC00205P59089 165 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 IDNKQ5T6J7 187 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 SAMD5Q5TGI4 173 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 C18orf65Q6ZTR6 163 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 NUDCD2Q8WVJ2 157 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 PHF21AQ96BD5 680 aa16.12■□□□□ 0.17
VTI1B-205ENST00000555543 ZNF107Q9UII5 783 aaPredicted RBP16.12■□□□□ 0.17
VTI1B-205ENST00000555543 OR5H14A6NHG9 310 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 TRIM64CA6NLI5 447 aa16.11■□□□□ 0.17
VTI1B-205ENST00000555543 NDUFA3O95167 84 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms