RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MIPP30301 263 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 SNCAP37840 140 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 GPR6P46095 362 aaPredicted RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 GABRA2P47869 451 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR3A4PP47883 348 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 UQCRFS1P47985 274 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 DNASE1L1P49184 302 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 GNG4P50150 75 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 POLR2HP52434 150 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 LSM3P62310 102 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 HIST1H3AP68431 136 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR2F1Q13607 317 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 TMEM183BQ1AE95 376 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 PYDC2Q56P42 97 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 LRRC10Q5BKY1 277 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 UTF1Q5T230 341 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 TPTE2P1Q5T6R2 138 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ZNF705AQ6ZN79 300 aaPredicted RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 SLC25A26Q70HW3 274 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 UBALD2Q8IYN6 164 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 SMIM20Q8N5G0 67 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 C8orf31Q8N9H6 132 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 CDRT4Q8N9R6 151 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ZNF439Q8NDP4 499 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ST6GALNAC3Q8NDV1 305 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 GPR26Q8NDV2 337 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR4K2Q8NGD2 314 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR6T1Q8NGN1 323 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR1S2Q8NGQ3 325 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR13G1Q8NGZ3 307 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ZNF418Q8TF45 676 aaPredicted RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 IL22RA2Q969J5 263 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 TMEM106AQ96A25 262 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 CXorf40BQ96DE9 158 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 NUS1Q96E22 293 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 TIMD4Q96H15 378 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 BTF3L4Q96K17 158 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR10C1Q96KK4 312 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 YPEL4Q96NS1 127 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 LYSMD1Q96S90 227 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 IMMP2LQ96T52 175 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 MGLLQ99685 303 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ZNF670Q9BS34 389 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 SELENOIQ9C0D9 397 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 SLC25A31Q9H0C2 315 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ARL6Q9H0F7 186 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR51I1Q9H343 314 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 OR52D1Q9H346 318 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 BANF2Q9H503 90 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 TMEM27Q9HBJ8 222 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 PRSS16Q9NQE7 514 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 DMAC2Q9NW81 257 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 CLN8Q9UBY8 286 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 MARCOQ9UEW3 520 aaPredicted RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 HSPB8Q9UJY1 196 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ERG28Q9UKR5 140 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 MRPS16Q9Y3D3 137 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 CSDC2Q9Y534 153 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 ZSWIM8A7E2V4 1837 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 LOXHD1Q8IVV2 1947 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 KDM3BQ7LBC6 1761 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 RBBP6Q7Z6E9 1792 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 LRRC37A3O60309 1634 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 LRP6O75581 1613 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 PTPRMP28827 1452 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 TJP1Q07157 1748 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SIGLEC1Q9BZZ2 1709 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 DOCK2Q92608 1830 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 ADAMTSL3P82987 1691 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 RREB1Q92766 1687 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 IGHV1-69-2A0A0G2JMI3 117 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 LOC100131303A0A0U1RQF7 123 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 KBTBD11-OT1A0A1B0GTJ5 212 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 A0A1W2PRS3 328 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 TCRBV9S1A1TA0A576 114 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 C7orf77A4D0Y5 90 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 TMEM189A5PLL7 270 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 NAP1L6A6NFF2 107 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 GGT3PA6NGU5 568 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 FAM166BA8MTA8 275 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 FAM220BPB1ANY3 271 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 ZNF878C9JN71 531 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 FTCDNL1E5RQL4 147 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 ZNF670-ZNF695F2Z2N8 137 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 DEGS1O15121 323 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BKO60814 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 ATP5LO75964 103 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 PROSCO94903 275 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 VENTXO95231 258 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 FARS2O95363 451 aaKnown RBP2.45□□□□□ -2.02
USP28-210ENST00000542033 NRASP01111 189 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SEMG1P04279 462 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 ALDOBP05062 364 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 IL5P05113 134 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 LGALS2P05162 132 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 CSN2P05814 226 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 HIST1H2BJP06899 126 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 CTSLP07711 333 aa2.45□□□□□ -2.02
USP28-210ENST00000542033 SOD3P08294 240 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms