RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PHYHIPLQ96FC7 376 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 PHF3Q92576 2039 aaKnown RBP12.81□□□□□ -0.36
USP47-207ENST00000527733 UBE2G1P62253 170 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 Q56UQ5 140 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 RPL7L1Q6DKI1 246 aaKnown RBP12.81□□□□□ -0.36
USP47-207ENST00000527733 C15orf54Q8N8G6 183 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 BVESQ8NE79 360 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 OR4F5Q8NH21 305 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 NEU4Q8WWR8 484 aaPredicted RBP12.81□□□□□ -0.36
USP47-207ENST00000527733 OR4F4Q96R69 305 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 BARX1Q9HBU1 254 aaPredicted RBP12.81□□□□□ -0.36
USP47-207ENST00000527733 RALYQ9UKM9 306 aaKnown RBP12.81□□□□□ -0.36
USP47-207ENST00000527733 RNF24Q9Y225 148 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 MT-ND4LP03901 98 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 BTN1A1Q13410 526 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 RHOVQ96L33 236 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
USP47-207ENST00000527733 PIMREGQ9BSJ6 248 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 OR51I2Q9H344 312 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 FFAR4Q5NUL3 377 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 C19orf12Q9NSK7 152 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 PGLYRP1O75594 196 aaPredicted RBP12.8□□□□□ -0.36
USP47-207ENST00000527733 SLC25A4P12235 298 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 WNT5AP41221 380 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 PDLIM4P50479 330 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 CLLU1Q5K131 121 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 MRPL37Q9BZE1 423 aaKnown RBP12.8□□□□□ -0.36
USP47-207ENST00000527733 OR1A1Q9P1Q5 309 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 HEATR1Q9H583 2144 aaKnown RBP12.8□□□□□ -0.36
USP47-207ENST00000527733 MGST1P10620 155 aaKnown RBP12.8□□□□□ -0.36
USP47-207ENST00000527733 TAGLN2P37802 199 aaKnown RBP12.8□□□□□ -0.36
USP47-207ENST00000527733 UCP3P55916 312 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 LURAP1Q96LR2 239 aa12.8□□□□□ -0.36
USP47-207ENST00000527733 CRYM-AS1A6NIL9 109 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 PGA5P0DJD9 388 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 FAM90A1Q86YD7 464 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 COL4A4P53420 1690 aaPredicted RBP12.79□□□□□ -0.36
USP47-207ENST00000527733 LRRK1Q38SD2 2015 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 ABCA4P78363 2273 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 ARG1P05089 322 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 P2RY4P51582 365 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 DYNLT3P51808 116 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 RXFP4Q8TDU9 374 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 SSX3Q99909 188 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 C5orf66Q9H5L9 145 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 TMEM231Q9H6L2 316 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 ZNF727A8MUV8 499 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 M0QZ24 198 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 ARF6P62330 175 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 FAM201AQ5SY85 155 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 TUBD1Q9UJT1 453 aa12.79□□□□□ -0.36
USP47-207ENST00000527733 TIMM8BQ9Y5J9 83 aaPredicted RBP12.79□□□□□ -0.36
USP47-207ENST00000527733 J3QR06 171 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 LIPFP07098 398 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 SSTR5P35346 364 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 SULT1A1P50225 295 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 NCR3LG1Q68D85 454 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 COMMD1Q8N668 190 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 OR9G1Q8NH87 305 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 BTF3L4Q96K17 158 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 LOC105371242A0A075B767 164 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 OR10J4P0C629 311 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 LGALS7P47929 136 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 OR2T6Q8NHC8 308 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 PNRC2Q9NPJ4 139 aaKnown RBP12.78□□□□□ -0.36
USP47-207ENST00000527733 A1L4Q6 167 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 CCL19Q99731 98 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 MMP24Q9Y5R2 645 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 HIST2H3PS2Q5TEC6 136 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 FOXL2NBQ6ZUU3 175 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 OR10A7Q8NGE5 316 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 ATP5SQ99766 215 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 SH2D2AQ9NP31 389 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 HILPDAQ9Y5L2 63 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 SLC25A15Q9Y619 301 aa12.78□□□□□ -0.36
USP47-207ENST00000527733 CLEC3BP05452 202 aa12.77□□□□□ -0.36
USP47-207ENST00000527733 NPY1RP25929 384 aa12.77□□□□□ -0.36
USP47-207ENST00000527733 RPS10P46783 165 aaKnown RBP12.77□□□□□ -0.36
USP47-207ENST00000527733 TIGITQ495A1 244 aa12.77□□□□□ -0.36
USP47-207ENST00000527733 SLC25A28Q96A46 364 aa12.77□□□□□ -0.36
USP47-207ENST00000527733 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.36
USP47-207ENST00000527733 A0A0G2JNJ9 132 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 C12orf77C9JDV5 145 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.37
USP47-207ENST00000527733 DCAF12L2Q5VW00 463 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 ABHD12Q8N2K0 398 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
USP47-207ENST00000527733 MS4A7Q9GZW8 240 aaPredicted RBP12.77□□□□□ -0.37
USP47-207ENST00000527733 Q9UFV3 132 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 MPDZO75970 2070 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 TMEM8BA6NDV4 472 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 ZG16O60844 167 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 HTR1DP28221 377 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 CLEC9AQ6UXN8 241 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 FAM216BQ8N7L0 139 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 ST6GALNAC3Q8NDV1 305 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 CXorf58Q96LI9 332 aa12.77□□□□□ -0.37
USP47-207ENST00000527733 HIST1H3AP68431 136 aa12.76□□□□□ -0.37
USP47-207ENST00000527733 MIDNQ504T8 468 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms