RNA–Protein interactions for RNA: ENST00000524579.1

CTNND1-209, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-209ENST00000524579 CCDC88CQ9P219 2028 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 IGKV3D-11A0A0A0MRZ8 115 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 TRAV17A0A0B4J275 112 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 SMIM31A0A1B0GVY4 71 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 A0A1B0GWA3 101 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 SMCO3A2RU48 225 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 ARRDC5A6NEK1 342 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 FAM25EA8MYX2 175 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 EFCAB9A8MZ26 197 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 H3BSA7 217 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 CHP2O43745 196 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 CDC40O60508 579 aaKnown RBP eCLIP2.34□□□□□ -2.03
CTNND1-209ENST00000524579 RCBTB2O95199 551 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 CLPSP04118 112 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 STAG3L3P0CL85 134 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 GSTM3P21266 225 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 CRHBPP24387 322 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 MAP2K4P45985 399 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 GPR6P46095 362 aaPredicted RBP2.34□□□□□ -2.03
CTNND1-209ENST00000524579 OMPP47874 163 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 SUB1P53999 127 aaKnown RBP eCLIP2.34□□□□□ -2.03
CTNND1-209ENST00000524579 FBXW4P57775 412 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 GABARAPL2P60520 117 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 COPZ1P61923 177 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 RAP1AP62834 184 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 TFF3Q07654 80 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 SCRN3Q0VDG4 424 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 TSPAN31Q12999 210 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 PMS2P3Q13401 168 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 APOFQ13790 326 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 DGCR6Q14129 220 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 NCF4Q15080 339 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 EBPQ15125 230 aaKnown RBP2.34□□□□□ -2.03
CTNND1-209ENST00000524579 ZNF141Q15928 474 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 C6orf226Q5I0X4 101 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 SPANXN2Q5MJ10 180 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 CLEC12AQ5QGZ9 265 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 HES5Q5TA89 166 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 GPR107Q5VW38 600 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 RAET1LQ5VY80 246 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 C12orf73Q69YU5 71 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 CLEC2AQ6UVW9 174 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 MBOAT2Q6ZWT7 520 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 OAFQ86UD1 273 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 MARCH3Q86UD3 253 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 CYP4Z2PQ8N1L4 340 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 MORN4Q8NDC4 146 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 PLPP5Q8NEB5 264 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 B3GNT7Q8NFL0 401 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 OR52L1Q8NGH7 329 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 OR8D4Q8NGM9 314 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 OR1L4Q8NGR5 311 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 OR51A7Q8NH64 312 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 KCNG3Q8TAE7 436 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 TMEM239Q8WW34 195 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 C10orf35Q96D05 121 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 RBMXL1Q96E39 390 aaKnown RBP2.34□□□□□ -2.03
CTNND1-209ENST00000524579 OR10C1Q96KK4 312 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 TSC22D3Q99576 134 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 PRSS27Q9BQR3 290 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 COPS4Q9BT78 406 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 PRRG3Q9BZD7 231 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 PLA2G12AQ9BZM1 189 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 ANKRD19PQ9H560 264 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 RPP21Q9H633 154 aaKnown RBP2.34□□□□□ -2.03
CTNND1-209ENST00000524579 CCNB1IP1Q9NPC3 277 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 KCNJ16Q9NPI9 418 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 UBQLN4Q9NRR5 601 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 SLC35A3Q9Y2D2 325 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 MED31Q9Y3C7 131 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 COMMD3-BMI1R4GMX3 469 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 HSPE1-MOB4S4R3N1 261 aa2.34□□□□□ -2.03
CTNND1-209ENST00000524579 MEGF8Q7Z7M0 2845 aa2.34□□□□□ -2.04
CTNND1-209ENST00000524579 ANK3Q12955 4377 aaKnown RBP2.34□□□□□ -2.04
CTNND1-209ENST00000524579 NUP214P35658 2090 aaPredicted RBP2.33□□□□□ -2.04
CTNND1-209ENST00000524579 MAP1AP78559 2803 aaPredicted RBP2.33□□□□□ -2.04
CTNND1-209ENST00000524579 MXRA5Q9NR99 2828 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 MGAM2Q2M2H8 2515 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 PKDREJQ9NTG1 2253 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 IGLV3-12A0A075B6K2 115 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 TRAV27A0A087WT01 109 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 TMED7-TICAM2A0A0A6YYA0 188 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 A0A0B4J2E0 115 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 PNMA8CA0A1B0GUJ8 204 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 A0A1B0GX12 115 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 EFCAB10A6NFE3 127 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 FAM183AA6NL82 134 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 C17orf51A8MQB3 221 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 ZNF99A8MXY4 864 aaPredicted RBP2.33□□□□□ -2.04
CTNND1-209ENST00000524579 LRRN3E7EW58 273 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 CDC42EP2O14613 210 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 MYL12BO14950 172 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 MPZL2O60487 215 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 ENTPD6O75354 484 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 UPK3AO75631 287 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 OR2J2O76002 312 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 VAMP5O95183 116 aa2.33□□□□□ -2.04
CTNND1-209ENST00000524579 GAPDHP04406 335 aaKnown RBP2.33□□□□□ -2.04
CTNND1-209ENST00000524579 HMGN1P05114 100 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms