RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 RDH12Q96NR8 316 aa11.22□□□□□ -0.61
CSTF3-204ENST00000524556 BANF2Q9H503 90 aa11.22□□□□□ -0.61
CSTF3-204ENST00000524556 RETNQ9HD89 108 aa11.22□□□□□ -0.61
CSTF3-204ENST00000524556 MRPS18AQ9NVS2 196 aaKnown RBP11.22□□□□□ -0.61
CSTF3-204ENST00000524556 LRRC42Q9Y546 428 aa11.22□□□□□ -0.61
CSTF3-204ENST00000524556 HERC2O95714 4834 aa11.22□□□□□ -0.61
CSTF3-204ENST00000524556 TFAP2AP05549 437 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 CT45A6P0DMU7 189 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 CT45A5P0DMU8 189 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 CT45A7P0DMV0 189 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 SIGIRRQ6IA17 410 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 GTSCR1Q86UQ5 136 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 OR9G4Q8NGQ1 327 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 RHOXF1Q8NHV9 184 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 GALMQ96C23 342 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 CLCC1Q96S66 551 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 SELENOIQ9C0D9 397 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 HIPK2Q9H2X6 1198 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 IFI27L2Q9H2X8 130 aa11.21□□□□□ -0.61
CSTF3-204ENST00000524556 C13orf42A0A1B0GVH6 325 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 OR5H14A6NHG9 310 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 H0YJW9 148 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 EI24O14681 340 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 OGG1O15527 345 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 RBBP9O75884 186 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 GSTP1P09211 210 aaKnown RBP11.2□□□□□ -0.62
CSTF3-204ENST00000524556 MGMTP16455 207 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 MC5RP33032 325 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 DMKNQ6E0U4 476 aaPredicted RBP11.2□□□□□ -0.62
CSTF3-204ENST00000524556 GLDNQ6ZMI3 551 aaPredicted RBP11.2□□□□□ -0.62
CSTF3-204ENST00000524556 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
CSTF3-204ENST00000524556 OR13C5Q8NGS8 318 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 RNF5Q99942 180 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 PIPOXQ9P0Z9 390 aa11.2□□□□□ -0.62
CSTF3-204ENST00000524556 RPL36Q9Y3U8 105 aaKnown RBP11.2□□□□□ -0.62
CSTF3-204ENST00000524556 TRAV8-7A0A075B6U6 113 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 TRBV5-5A0A0J9YX44 114 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 ANKRD34BA5PLL1 514 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 H7C2Y5 167 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 RAB29O14966 203 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 ST8SIA5O15466 376 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 CA2P00918 260 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 SNRPBP14678 240 aaKnown RBP11.19□□□□□ -0.62
CSTF3-204ENST00000524556 ALDH3A2P51648 485 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 SYNJ2BPP57105 145 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 PSG5Q15238 335 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 C6orf141Q5SZD1 244 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 AWAT2Q6E213 333 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 JAGN1Q8N5M9 183 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 SMIM19Q96E16 107 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 Q96M66 194 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 OR14A2Q96R54 314 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 FAM110AQ9BQ89 295 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 FGF20Q9NP95 211 aaPredicted RBP11.19□□□□□ -0.62
CSTF3-204ENST00000524556 ZNF355PQ9NSJ1 428 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
CSTF3-204ENST00000524556 CKLFQ9UBR5 152 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 STEAP1Q9UHE8 339 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 WASHC3Q9Y3C0 194 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 CEPT1Q9Y6K0 416 aa11.19□□□□□ -0.62
CSTF3-204ENST00000524556 A0A0G2JLM5 398 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 H3BUA1 57 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 PDCD6O75340 191 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 CRTAPO75718 401 aaPredicted RBP11.18□□□□□ -0.62
CSTF3-204ENST00000524556 BAG2O95816 211 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 CSN3P07498 182 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 ETV1P50549 477 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 HMGN3Q15651 99 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 OR2G6Q5TZ20 316 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 LCN12Q6JVE5 192 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 CDH26Q8IXH8 852 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 Q8N402 240 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 POC5Q8NA72 575 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 GHSRQ92847 366 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 SIGLEC8Q9NYZ4 499 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 SLC23A1Q9UHI7 598 aa11.18□□□□□ -0.62
CSTF3-204ENST00000524556 KMT2AQ03164 3969 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 SHISA3A0PJX4 238 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 IZUMO1RA6ND01 250 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 SLC22A1O15245 554 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 FSTP19883 344 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 RPS11P62280 158 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSTF3-204ENST00000524556 Q499Y3 187 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 TMPRSS11AQ6ZMR5 421 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 OR5T1Q8NG75 326 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 IL1F10Q8WWZ1 152 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 BABAM2Q9NXR7 383 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 ABRACLQ9P1F3 81 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 DNAH10Q8IVF4 4471 aa11.17□□□□□ -0.62
CSTF3-204ENST00000524556 TRBV5-7A0A0A0MS05 114 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 SPDEFO95238 335 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 LALBAP00709 142 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 MECP2P51608 486 aaKnown RBP11.16□□□□□ -0.62
CSTF3-204ENST00000524556 FXYD3Q14802 87 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 TATDN3Q17R31 274 aa11.16□□□□□ -0.62
CSTF3-204ENST00000524556 YIF1BQ5BJH7 314 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms