RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	CD200R1L	Q6Q8B3	271 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	IL34	Q6ZMJ4	242 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	ANKRD13B	Q86YJ7	626 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	ZFP41	Q8N8Y5	198 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	GHSR	Q92847	366 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	SMIM19	Q96E16	107 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161		Q96M66	194 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161		Q96MT0	163 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	RDH12	Q96NR8	316 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	SLC29A1	Q99808	456 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	ELOVL1	Q9BW60	279 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	RPL36	Q9Y3U8	105 aa	Known RBP	10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	ANKRD34B	A5PLL1	514 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	CA11	O75493	328 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	WBP4	O75554	376 aa	Known RBP	10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	CRTAP	O75718	401 aa	Predicted RBP	10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	AKIRIN2	Q53H80	203 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	C6orf141	Q5SZD1	244 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	DMKN	Q6E0U4	476 aa	Predicted RBP	10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	TCTEX1D1	Q8N7M0	179 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	OR2AK2	Q8NG84	335 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	FAM46B	Q96A09	425 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	OR14A2	Q96R54	314 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	BABAM2	Q9NXR7	383 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	CLEC2D	Q9UHP7	191 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	ADAM30	Q9UKF2	790 aa		10.45	□□□□□ -0.74
SAMM50-204	ENST00000493161	TRBV5-7	A0A0A0MS05	114 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	LOC100130705	A0A1B0GUX0	176 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	FAM90A7P	A6NKC0	464 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	FAM90A23P	A8MXZ1	464 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161		H0YJW9	148 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	PDCD6	O75340	191 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	CA2	P00918	260 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	TRGV3	P03979	118 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	GLA	P06280	429 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	FST	P19883	344 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	LINC00205	P59089	165 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	DEFA5	Q01523	94 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	HMGN3	Q15651	99 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161		Q499Y3	187 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	LY6G6F	Q5SQ64	297 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	PYHIN1	Q6K0P9	492 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	ZNF554	Q86TJ5	538 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	IL1F10	Q8WWZ1	152 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	GALM	Q96C23	342 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	ABHD14B	Q96IU4	210 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	PGLYRP3	Q96LB9	341 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	FAM110A	Q9BQ89	295 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	SULT4A1	Q9BR01	284 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	THAP7	Q9BT49	309 aa	Predicted RBP	10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	TMED9	Q9BVK6	235 aa		10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	METTL1	Q9UBP6	276 aa	Known RBP	10.44	□□□□□ -0.74
SAMM50-204	ENST00000493161	IZUMO1R	A6ND01	250 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	ARPC1B	O15143	372 aa	Known RBP	10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	JTB	O76095	146 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	RGS11	O94810	467 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	GSTP1	P09211	210 aa	Known RBP	10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	KLF5	Q13887	457 aa	Predicted RBP	10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	PSG5	Q15238	335 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	ZNF562	Q6V9R5	426 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	TMPRSS11A	Q6ZMR5	421 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	DRAXIN	Q8NBI3	349 aa	Predicted RBP	10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	FAAP24	Q9BTP7	215 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	CKLF	Q9UBR5	152 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	RNF150	Q9ULK6	438 aa		10.43	□□□□□ -0.74
SAMM50-204	ENST00000493161	PNMA8C	A0A1B0GUJ8	204 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161		H7C2Y5	167 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	PROP1	O75360	226 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	CIB2	O75838	187 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	TFAP2A	P05549	437 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	SYNJ2BP	P57105	145 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	SSBP2	P81877	361 aa	Predicted RBP	10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	YIF1B	Q5BJH7	314 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	OR10K2	Q6IF99	312 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	FAM71F2	Q6NXP2	309 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	ZNF485	Q8NCK3	441 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	OR5T1	Q8NG75	326 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	OR5AN1	Q8NGI8	311 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	OR9G4	Q8NGQ1	327 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	GRPEL2	Q8TAA5	225 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	SLA2	Q9H6Q3	261 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	TUBA4B	Q9H853	241 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	RANGRF	Q9HD47	186 aa	Predicted RBP	10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	ZNF355P	Q9NSJ1	428 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	SLC23A1	Q9UHI7	598 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	WASHC3	Q9Y3C0	194 aa		10.42	□□□□□ -0.74
SAMM50-204	ENST00000493161	OR5H14	A6NHG9	310 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	RAB29	O14966	203 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	TRBV12-3	P01733	135 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	IGKV1-16	P04430	117 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	IFNA6	P05013	189 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	CSN3	P07498	182 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	DCK	P27707	260 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	CAPG	P40121	348 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	RASSF2	P50749	326 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	C6orf201	Q7Z4U5	140 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	SVOP	Q8N4V2	548 aa		10.41	□□□□□ -0.74
SAMM50-204	ENST00000493161	DERL3	Q96Q80	235 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms