RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	ZNF107	Q9UII5	783 aa	Predicted RBP	11.78	□□□□□ -0.52
CCNL1-222	ENST00000479596	ZNF580	Q9UK33	172 aa		11.78	□□□□□ -0.52
CCNL1-222	ENST00000479596	BLOC1S6	Q9UL45	172 aa		11.78	□□□□□ -0.52
CCNL1-222	ENST00000479596		V9GY05	133 aa		11.78	□□□□□ -0.52
CCNL1-222	ENST00000479596	DNAH9	Q9NYC9	4486 aa		11.77	□□□□□ -0.52
CCNL1-222	ENST00000479596	IGKV1-6	A0A0C4DH72	117 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	ATP6V1G2	O95670	118 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	SLC6A1	P30531	599 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR10A3	P58181	314 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	FOXE3	Q13461	319 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	HES5	Q5TA89	166 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	FAM71F2	Q6NXP2	309 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	ZNF695	Q8IW36	515 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	NPB	Q8NG41	125 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	MRAP	Q8TCY5	172 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	RAX2	Q96IS3	184 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	DUX3	Q96PT4	197 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596		Q9N2K0	584 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	C12orf4	Q9NQ89	552 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	KCNK7	Q9Y2U2	307 aa		11.77	□□□□□ -0.53
CCNL1-222	ENST00000479596	TRAV1-2	A0A0B4J238	106 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	NUDT19	A8MXV4	375 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	ITGB1BP1	O14713	200 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	RRP9	O43818	475 aa	Known RBP	11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	NDUFA3	O95167	84 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	IGHG4	P01861	327 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	HLA-DRB1	P01911	266 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	ELANE	P08246	267 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	SCT	P09683	121 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	CT45A6	P0DMU7	189 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	CT45A5	P0DMU8	189 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	CT45A7	P0DMV0	189 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	MYCNOS	P40205	109 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	GABARAPL2	P60520	117 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	EGFEM1P	Q0D2K5	195 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	MOGAT2	Q3SYC2	334 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	FAM131A	Q6UXB0	335 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	NR2C2AP	Q86WQ0	139 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	ABHD14B	Q96IU4	210 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	KCTD7	Q96MP8	289 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	GON7	Q9BXV9	100 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	PIPOX	Q9P0Z9	390 aa		11.76	□□□□□ -0.53
CCNL1-222	ENST00000479596	IGHV7-81	A0A0B4J1V7	117 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	TRDV1	A0A1B0GX56	115 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596		K7EIL1	84 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	RAB29	O14966	203 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	NBR2	O15453	112 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	DENR	O43583	198 aa	Known RBP	11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	PROP1	O75360	226 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	DUS4L	O95620	317 aa	Known RBP	11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	PSMB8	P28062	276 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	HOXD3	P31249	432 aa	Predicted RBP	11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	PSMD7	P51665	324 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	C5orf64	Q2M2E5	130 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	DEFB136	Q30KP8	78 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR56B1	Q8NGI3	324 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	MYOZ3	Q8TDC0	251 aa		11.75	□□□□□ -0.53
CCNL1-222	ENST00000479596	COL7A1	Q02388	2944 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596		A0A0B4J203	849 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	IFITM5	A6NNB3	132 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596		G3V318	75 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596		H0YJW9	148 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	ATP6V0E1	O15342	81 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	VDAC1	P21796	283 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	ZBTB25	P24278	435 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	PPIF	P30405	207 aa	Known RBP	11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	CEACAM6	P40199	344 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	CDX1	P47902	265 aa	Predicted RBP	11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	NDP	Q00604	133 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	KIAA0141	Q14154	515 aa	Predicted RBP	11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	UBE2U	Q5VVX9	321 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	PTX4	Q96A99	478 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	CMSS1	Q9BQ75	279 aa	Known RBP	11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR51J1	Q9H342	316 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	RAB22A	Q9UL26	194 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	MGAT4A	Q9UM21	535 aa		11.74	□□□□□ -0.53
CCNL1-222	ENST00000479596	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	TRDC	B7Z8K6	153 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	CCL24	O00175	119 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	RAB27B	O00194	218 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	PDCD5	O14737	125 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	MRPS14	O60783	128 aa	Known RBP	11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	SNRPB	P14678	240 aa	Known RBP	11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	KIR2DS1	Q14954	304 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	C19orf54	Q5BKX5	351 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	C22orf42	Q6IC83	251 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	SPART	Q8N0X7	666 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR5AN1	Q8NGI8	311 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	KLK15	Q9H2R5	256 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	RNF150	Q9ULK6	438 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	FBXO7	Q9Y3I1	522 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	WSB1	Q9Y6I7	421 aa		11.73	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR5H14	A6NHG9	310 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	MFNG	O00587	321 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	IGLV1-40	P01703	118 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	OR5H8	P0DN80	308 aa		11.72	□□□□□ -0.53
CCNL1-222	ENST00000479596	RAB3B	P20337	219 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 77 ms