RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 CD200P41217 278 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 PLGLAQ15195 96 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 CLN8Q9UBY8 286 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 IGKV1D-13A0A0B4J2D9 117 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 A0A1W2PPQ1 181 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 ETV2O00321 342 aaPredicted RBP9.93□□□□□ -0.82
NPHP4-204ENST00000460696 IGKV1-13P0DP09 117 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 CFPP27918 469 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 UCP3P55916 312 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 RPS23P62266 143 aaKnown RBP9.93□□□□□ -0.82
NPHP4-204ENST00000460696 NCR3LG1Q68D85 454 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 GLRX5Q86SX6 157 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 RARRES2Q99969 163 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 PROK2Q9HC23 129 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 GLRX2Q9NS18 164 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 H0Y980 276 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 COX5BP10606 129 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 OTX1P32242 354 aaPredicted RBP9.92□□□□□ -0.82
NPHP4-204ENST00000460696 ETV3LQ6ZN32 361 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 MOGAT3Q86VF5 341 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 OR5P3Q8WZ94 311 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 OPN3Q9H1Y3 402 aaPredicted RBP9.92□□□□□ -0.82
NPHP4-204ENST00000460696 MUC22E2RYF6 1773 aaPredicted RBP9.92□□□□□ -0.82
NPHP4-204ENST00000460696 DENND4AQ7Z401 1863 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 PPP5D1E7EU14 171 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 WNT9BO14905 357 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 PRB1P04280 392 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
NPHP4-204ENST00000460696 KLF14Q8TD94 323 aaPredicted RBP9.92□□□□□ -0.82
NPHP4-204ENST00000460696 HIVEP3Q5T1R4 2406 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 A0A1W2PPE3 182 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 OOEPA6NGQ2 149 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 LRRC30A6NM36 301 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 H3BQ15 152 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 AQP7O14520 342 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 ANOS1P23352 680 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 KLF3P57682 345 aaPredicted RBP9.92□□□□□ -0.82
NPHP4-204ENST00000460696 B3GALT5-AS1P59052 145 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 ACOT6Q3I5F7 207 aaPredicted RBP9.92□□□□□ -0.82
NPHP4-204ENST00000460696 C15orf54Q8N8G6 183 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 CYB561D1Q8N8Q1 229 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 BSCL2Q96G97 398 aaPredicted RBP9.92□□□□□ -0.82
NPHP4-204ENST00000460696 POM121L2Q96KW2 1035 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 MSRB2Q9Y3D2 182 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 MYO9AB2RTY4 2548 aa9.92□□□□□ -0.82
NPHP4-204ENST00000460696 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 CCL21O00585 134 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 PITX3O75364 302 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 ZNF737O75373 536 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 HBZP02008 142 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 KCNIP4Q6PIL6 250 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 SLC16A13Q7RTY0 426 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 DTD1Q8TEA8 209 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 MSI2Q96DH6 328 aaKnown RBP9.91□□□□□ -0.82
NPHP4-204ENST00000460696 BOD1Q96IK1 185 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 TRGV10A0A0A0MS01 117 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 DNASE2O00115 360 aaPredicted RBP9.91□□□□□ -0.82
NPHP4-204ENST00000460696 DANCRP0C864 163 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 NTF4P34130 210 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 RSPO1Q2MKA7 263 aaPredicted RBP9.91□□□□□ -0.82
NPHP4-204ENST00000460696 BHLHA15Q7RTS1 189 aaPredicted RBP9.91□□□□□ -0.82
NPHP4-204ENST00000460696 FGFRL1Q8N441 504 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 OR10G4Q8NGN3 311 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 OR10G9Q8NGN4 311 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 OR10G7Q8NGN6 311 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 EYSQ5T1H1 3165 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 MTORP42345 2549 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 NKX6-3A6NJ46 265 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 MBP02144 154 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 CRYABP02511 175 aaKnown RBP9.91□□□□□ -0.82
NPHP4-204ENST00000460696 DLK1P80370 383 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 COL10A1Q03692 680 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 NCMAPQ5T1S8 102 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 LINC00596Q86U02 117 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 SAXO1Q8IYX7 474 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 DMRTA2Q96SC8 542 aa9.91□□□□□ -0.82
NPHP4-204ENST00000460696 LYRM2Q9NU23 88 aaPredicted RBP9.91□□□□□ -0.82
NPHP4-204ENST00000460696 MDFIC2A0A1B0GVS7 189 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 PQLC2LA1A4F0 135 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 A8MXE2 369 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 CD82P27701 267 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 GFRA1P56159 465 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 PKIBQ9C010 78 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 ZNF665Q9H7R5 613 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 DBX1A6NMT0 343 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 MMP7P09237 267 aaPredicted RBP9.9□□□□□ -0.82
NPHP4-204ENST00000460696 FBP1P09467 338 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 OR5D13Q8NGL4 314 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 CYTL1Q9NRR1 136 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 IL36GQ9NZH8 169 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 DUXBA0A1W2PPF3 345 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 RAB5AP20339 215 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 OR13D1Q8NGV5 346 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 R3HDM4Q96D70 268 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 EGLN1Q9GZT9 426 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 RPH3ALQ9UNE2 315 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 PLCE1Q9P212 2302 aa9.9□□□□□ -0.82
NPHP4-204ENST00000460696 H0YL77 283 aa9.9□□□□□ -0.83
NPHP4-204ENST00000460696 HTD2P86397 168 aa9.9□□□□□ -0.83
NPHP4-204ENST00000460696 TNFAIP6P98066 277 aaPredicted RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms