RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TMEM106BQ9NUM4 274 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 TMPRSS2O15393 492 aa17.54■□□□□ 0.4
PTPRF-207ENST00000436724 CLDN14O95500 239 aa17.54■□□□□ 0.4
PTPRF-207ENST00000436724 IFNA21P01568 189 aa17.54■□□□□ 0.4
PTPRF-207ENST00000436724 FOXRED2Q8IWF2 684 aa17.54■□□□□ 0.4
PTPRF-207ENST00000436724 RALYQ9UKM9 306 aaKnown RBP17.54■□□□□ 0.4
PTPRF-207ENST00000436724 DSCAML1Q8TD84 2053 aa17.53■□□□□ 0.4
PTPRF-207ENST00000436724 NINJ1Q92982 152 aa17.53■□□□□ 0.4
PTPRF-207ENST00000436724 NUPL2O15504 423 aaKnown RBP17.53■□□□□ 0.4
PTPRF-207ENST00000436724 SPINT2O43291 252 aa17.53■□□□□ 0.4
PTPRF-207ENST00000436724 ATF4P18848 351 aaPredicted RBP17.53■□□□□ 0.4
PTPRF-207ENST00000436724 F2RP25116 425 aa17.53■□□□□ 0.4
PTPRF-207ENST00000436724 OR5D13Q8NGL4 314 aa17.53■□□□□ 0.4
PTPRF-207ENST00000436724 AQP10Q96PS8 301 aa17.53■□□□□ 0.4
PTPRF-207ENST00000436724 ARHGDIBP52566 201 aa17.52■□□□□ 0.4
PTPRF-207ENST00000436724 S100A10P60903 97 aa17.52■□□□□ 0.4
PTPRF-207ENST00000436724 DRAM1Q8N682 238 aa17.52■□□□□ 0.4
PTPRF-207ENST00000436724 OR2D2Q9H210 308 aa17.52■□□□□ 0.4
PTPRF-207ENST00000436724 PPIAL4EA0A075B759 164 aa17.52■□□□□ 0.39
PTPRF-207ENST00000436724 PPIAL4DF5H284 164 aa17.52■□□□□ 0.39
PTPRF-207ENST00000436724 IGHV3-7P01780 117 aa17.52■□□□□ 0.39
PTPRF-207ENST00000436724 FAM157CP0CG43 387 aa17.52■□□□□ 0.39
PTPRF-207ENST00000436724 PPIAL4FP0DN26 164 aa17.52■□□□□ 0.39
PTPRF-207ENST00000436724 GZMHP20718 246 aa17.52■□□□□ 0.39
PTPRF-207ENST00000436724 C1orf87Q8N0U7 546 aa17.52■□□□□ 0.39
PTPRF-207ENST00000436724 PPIAL4AQ9Y536 164 aa17.52■□□□□ 0.39
PTPRF-207ENST00000436724 TRAV38-1A0A0B4J264 116 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 RAB19A4D1S5 217 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 LYNX1G3V0Z9 82 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 CDS2O95674 445 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 LYNX1P0DP58 116 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 UCP1P25874 307 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 CR1LQ2VPA4 569 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 ZNF695Q8IW36 515 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 SELENOHQ8IZQ5 122 aaKnown RBP17.51■□□□□ 0.39
PTPRF-207ENST00000436724 C5orf30Q96GV9 206 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 TMEM56Q96MV1 263 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 TMEM56-RWDD3S4R434 201 aa17.51■□□□□ 0.39
PTPRF-207ENST00000436724 IGHV1-69-2A0A0G2JMI3 117 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 H0Y980 276 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 FCN3O75636 299 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 UTF1Q5T230 341 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 TRAT1Q6PIZ9 186 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 UQCC3Q6UW78 93 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 TCF23Q7RTU1 214 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 ZNF808Q8N4W9 903 aaPredicted RBP17.5■□□□□ 0.39
PTPRF-207ENST00000436724 OR52M1Q8NGK5 317 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 TMED6Q8WW62 240 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 C14orf79Q96F83 325 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 TANC2Q9HCD6 1990 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 DNASE2O00115 360 aaPredicted RBP17.5■□□□□ 0.39
PTPRF-207ENST00000436724 SCGB1D2O95969 90 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 ZNF16P17020 682 aaPredicted RBP17.5■□□□□ 0.39
PTPRF-207ENST00000436724 S100GP29377 79 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 ABHD14BQ96IU4 210 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 TOLLIPQ9H0E2 274 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 FLNCQ14315 2725 aa17.5■□□□□ 0.39
PTPRF-207ENST00000436724 C19orf84I3L1E1 186 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 ST8SIA5O15466 376 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 HTD2P86397 168 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 DEFA5Q01523 94 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 LYPD2Q6UXB3 125 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 RNF141Q8WVD5 230 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 AKR1E2Q96JD6 320 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 CALYQ9NYX4 217 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 OR6C3Q9NZP0 311 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 GNG12Q9UBI6 72 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 USF3Q68DE3 2245 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 CGB3P0DN86 165 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 CGB7P0DN87 165 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 NDUFB7P17568 137 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 SRPXP78539 464 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 C17orf58Q2M2W7 97 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 ZNF645Q8N7E2 425 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 FAM234AQ9H0X4 552 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 PSG11Q9UQ72 335 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 TMED3Q9Y3Q3 217 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 EPG5Q9HCE0 2579 aa17.49■□□□□ 0.39
PTPRF-207ENST00000436724 A0A1W2PPR1 153 aa17.48■□□□□ 0.39
PTPRF-207ENST00000436724 PRB1P04280 392 aa17.48■□□□□ 0.39
PTPRF-207ENST00000436724 LOXL3P58215 753 aa17.48■□□□□ 0.39
PTPRF-207ENST00000436724 CNTNAP3BQ96NU0 1288 aa17.48■□□□□ 0.39
PTPRF-207ENST00000436724 CNTNAP3Q9BZ76 1288 aa17.48■□□□□ 0.39
PTPRF-207ENST00000436724 NKX6-3A6NJ46 265 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 BTNL3Q6UXE8 466 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 LEAP2Q969E1 77 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 NARS2Q96I59 477 aaKnown RBP17.47■□□□□ 0.39
PTPRF-207ENST00000436724 AGMATQ9BSE5 352 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 SLC25A10Q9UBX3 287 aaPredicted RBP17.47■□□□□ 0.39
PTPRF-207ENST00000436724 LSM5Q9Y4Y9 91 aaKnown RBP17.47■□□□□ 0.39
PTPRF-207ENST00000436724 TMEM218A2RU14 115 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 MBPP02686 304 aaPredicted RBP17.47■□□□□ 0.39
PTPRF-207ENST00000436724 HKR1P10072 659 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 COL8A2P25067 703 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 AKR1C2P52895 323 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 AKR1C1Q04828 323 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 MORN2Q502X0 79 aa17.47■□□□□ 0.39
PTPRF-207ENST00000436724 SPTAN1Q13813 2472 aaKnown RBP17.47■□□□□ 0.39
PTPRF-207ENST00000436724 YLPM1P49750 1951 aaKnown RBP17.46■□□□□ 0.39
PTPRF-207ENST00000436724 TRGV10A0A0A0MS01 117 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms