RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ST8SIA5O15466 376 aa16.34■□□□□ 0.21
HSPG2-205ENST00000427897 SOX6P35712 828 aa16.34■□□□□ 0.21
HSPG2-205ENST00000427897 GPR12P47775 334 aa16.34■□□□□ 0.21
HSPG2-205ENST00000427897 STPG2Q8N412 459 aa16.34■□□□□ 0.21
HSPG2-205ENST00000427897 COMMD1Q8N668 190 aa16.34■□□□□ 0.21
HSPG2-205ENST00000427897 CENPOQ9BU64 300 aa16.34■□□□□ 0.21
HSPG2-205ENST00000427897 MRPL20Q9BYC9 149 aaKnown RBP16.34■□□□□ 0.21
HSPG2-205ENST00000427897 GHITMQ9H3K2 345 aa16.34■□□□□ 0.21
HSPG2-205ENST00000427897 Q9N2K0 584 aa16.34■□□□□ 0.21
HSPG2-205ENST00000427897 A0A075B6Q4 140 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 SAA2-SAA4A0A096LPE2 208 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 SAA2P0DJI9 122 aaPredicted RBP16.33■□□□□ 0.2
HSPG2-205ENST00000427897 TALDO1P37837 337 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 OR3A3P47888 321 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 F2RL1P55085 397 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 ZNF833PQ6ZTB9 187 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 ODF3L1Q8IXM7 274 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 PHF21AQ96BD5 680 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 NABP2Q9BQ15 211 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 ZFP57Q9NU63 452 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 KIAA1456Q9P272 454 aa16.33■□□□□ 0.2
HSPG2-205ENST00000427897 SHISA3A0PJX4 238 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 SMIM30A4D0T7 59 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 TRDCB7Z8K6 153 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 SCTP09683 121 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 SDC2P34741 201 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 ARFRP1Q13795 201 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 OXLD1Q5BKU9 147 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 TEX38Q6PEX7 206 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 ANKRD13BQ86YJ7 626 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 OR10R2Q8NGX6 335 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 ATG5Q9H1Y0 275 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 PLSCR3Q9NRY6 295 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 ZNF221Q9UK13 617 aa16.32■□□□□ 0.2
HSPG2-205ENST00000427897 WNK1Q9H4A3 2382 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 MEGF8Q7Z7M0 2845 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 LINC01548A6NM66 108 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 FOXI3A8MTJ6 420 aaPredicted RBP16.31■□□□□ 0.2
HSPG2-205ENST00000427897 NOTOA8MTQ0 251 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 H7C2Y5 167 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 LDLRAD4O15165 306 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 SLC2A2P11168 524 aaPredicted RBP16.31■□□□□ 0.2
HSPG2-205ENST00000427897 RAB6AP20340 208 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 VDAC1P21796 283 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 ACTBP60709 375 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 PNLIPRP3Q17RR3 467 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 PLAC9Q5JTB6 97 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 FAM71F2Q6NXP2 309 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 ABHD14BQ96IU4 210 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 OR1A1Q9P1Q5 309 aa16.31■□□□□ 0.2
HSPG2-205ENST00000427897 ZNF107Q9UII5 783 aaPredicted RBP16.31■□□□□ 0.2
HSPG2-205ENST00000427897 VWFP04275 2813 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 GABARAPO95166 117 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 GSTP1P09211 210 aaKnown RBP16.3■□□□□ 0.2
HSPG2-205ENST00000427897 MC5RP33032 325 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 LSM3P62310 102 aaKnown RBP16.3■□□□□ 0.2
HSPG2-205ENST00000427897 PLA2G7Q13093 441 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 PLGLAQ15195 96 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 BEAN1Q3B7T3 259 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 RPL39P5Q59GN2 51 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 SAMD5Q5TGI4 173 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 GPR107Q5VW38 600 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 CROCCP3Q8IVE0 287 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 RBMXL1Q96E39 390 aaKnown RBP16.3■□□□□ 0.2
HSPG2-205ENST00000427897 IFI27L2Q9H2X8 130 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 RNF167Q9H6Y7 350 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 RNF150Q9ULK6 438 aa16.3■□□□□ 0.2
HSPG2-205ENST00000427897 ITGB1BP1O14713 200 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 NBR2O15453 112 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 PLXNB1O43157 2135 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 TMEM127O75204 238 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 GNB3P16520 340 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 SERPINB10P48595 397 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 RPL23AP62750 156 aaKnown RBP16.29■□□□□ 0.2
HSPG2-205ENST00000427897 MXD1Q05195 221 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 KIR2DS1Q14954 304 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 ARL6IP1Q15041 203 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 CXorf66Q5JRM2 361 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-205ENST00000427897 Q6ZPA2 131 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 FAM71E2Q8N5Q1 922 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 KLHL30-AS1Q8NEE0 82 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 OR4A4PQ8NGN8 299 aa16.29■□□□□ 0.2
HSPG2-205ENST00000427897 C11orf54Q9H0W9 315 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-205ENST00000427897 RBM7Q9Y580 266 aaKnown RBP16.29■□□□□ 0.2
HSPG2-205ENST00000427897 A0A0B4J203 849 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 BET1O15155 118 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 NOL3O60936 208 aaKnown RBP16.28■□□□□ 0.2
HSPG2-205ENST00000427897 OR5H8P0DN80 308 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 MOGAT2Q3SYC2 334 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 LIN54Q6MZP7 749 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 SFXN4Q6P4A7 337 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 FAM131AQ6UXB0 335 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 OR10J5Q8NHC4 309 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 BCL7BQ9BQE9 202 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 HSPB9Q9BQS6 159 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 DAPK2Q9UIK4 370 aa16.28■□□□□ 0.2
HSPG2-205ENST00000427897 OR5H14A6NHG9 310 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 FABP7O15540 132 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 IGLL1P15814 213 aa16.27■□□□□ 0.2
HSPG2-205ENST00000427897 HIST1H1DP16402 221 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms