RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ABCB10Q9NRK6 738 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 ANAPC10Q9UM13 185 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 BTBD17A6NE02 478 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 OOSP1A8MZH6 123 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 TRIM77I1YAP6 450 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 ITGB1BP1O14713 200 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 HSD17B6O14756 317 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 TIMM23O14925 209 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 DIRAS3O95661 229 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 PMP2P02689 132 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 GAPDHP04406 335 aaKnown RBP7.46□□□□□ -1.22
PDGFC-202ENST00000422544 OR8U9P0C7N5 309 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 NAT1P18440 290 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 NFYAP23511 347 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-202ENST00000422544 HLA-DMAP28067 261 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 OR3A3P47888 321 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 RAB7AP51149 207 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF137PP52743 207 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 DGCR2P98153 550 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 AANATQ16613 207 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 CNPY1Q3B7I2 92 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 PYHIN1Q6K0P9 492 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 CCDC144NLQ6NUI1 221 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 C16orf87Q6PH81 154 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 FAM131AQ6UXB0 335 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 MOB3BQ86TA1 216 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 H1FOOQ8IZA3 346 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-202ENST00000422544 TMEM86BQ8N661 226 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 DRAM1Q8N682 238 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 OR5AP2Q8NGF4 316 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 OR8U1Q8NH10 309 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 OR5R1Q8NH85 324 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 C15orf40Q8WUR7 153 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 RTN4IP1Q8WWV3 396 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-202ENST00000422544 FCAMRQ8WWV6 532 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 AGMATQ9BSE5 352 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 CHIAQ9BZP6 476 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 TOLLIPQ9H0E2 274 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 BATF3Q9NR55 127 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 NECAP2Q9NVZ3 263 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 KLK11Q9UBX7 282 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 POMT1Q9Y6A1 747 aa7.46□□□□□ -1.22
PDGFC-202ENST00000422544 SAA2-SAA4A0A096LPE2 208 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 IGHV3-72A0A0B4J1Y9 119 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 IGHV1-3A0A0C4DH29 117 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 A0A1W2PPI3 338 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RNF212BA8MTL3 300 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 GABARAPH6UMI1 98 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RAB29O14966 203 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 LANCL1O43813 399 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RBBP9O75884 186 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RNASE1P07998 156 aaKnown RBP7.45□□□□□ -1.22
PDGFC-202ENST00000422544 SAA2P0DJI9 122 aaPredicted RBP7.45□□□□□ -1.22
PDGFC-202ENST00000422544 OR5H8P0DN80 308 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 FCGR2CP31995 323 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 BRS3P32247 399 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RCVRNP35243 200 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 GPR12P47775 334 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RFX2P48378 723 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 DYNLT3P51808 116 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 ARHGDIBP52566 201 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF816Q0VGE8 651 aaPredicted RBP7.45□□□□□ -1.22
PDGFC-202ENST00000422544 CDK10Q15131 360 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 FBLN7Q53RD9 439 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RPL39P5Q59GN2 51 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 CCBE1Q6UXH8 406 aaPredicted RBP7.45□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF833PQ6ZTB9 187 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 TMEM219Q86XT9 240 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 TGIF2LXQ8IUE1 241 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 OR8H3Q8N146 312 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 OR6Q1Q8NGQ2 317 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 OR5H2Q8NGV7 314 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 OR56B4Q8NH76 319 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 CAPSLQ8WWF8 208 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 TAF15Q92804 592 aaKnown RBP eCLIP7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RBMXL1Q96E39 390 aaKnown RBP7.45□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF251Q9BRH9 671 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 PIPOXQ9P0Z9 390 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 MTFP1Q9UDX5 166 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF221Q9UK13 617 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 VPREB3Q9UKI3 123 aa7.45□□□□□ -1.22
PDGFC-202ENST00000422544 RBM7Q9Y580 266 aaKnown RBP7.45□□□□□ -1.22
PDGFC-202ENST00000422544 A6NDX4 124 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 FAM181BA6NEQ2 426 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF736B4DX44 427 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-202ENST00000422544 CTDSPLO15194 276 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 GPR137BO60478 399 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 PROP1O75360 226 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 SNRNP70P08621 437 aaKnown RBP7.44□□□□□ -1.22
PDGFC-202ENST00000422544 FAM106CPP0CH98 169 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 AADACP22760 399 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 HRH1P35367 487 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 LUMP51884 338 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-202ENST00000422544 TAS2R46P59540 309 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 MRPS10P82664 201 aaKnown RBP7.44□□□□□ -1.22
PDGFC-202ENST00000422544 HNF4GQ14541 408 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 KRTAP24-1Q3LI83 254 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 PYDC2Q56P42 97 aa7.44□□□□□ -1.22
PDGFC-202ENST00000422544 OVCH2Q7RTZ1 564 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms