RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 RPL39P5Q59GN2 51 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 TCTEX1D4Q5JR98 221 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 SLC35E3Q7Z769 313 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 LGALS14Q8TCE9 139 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 MAFIPQ8WZ33 124 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 S1PR3Q99500 378 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 ZNF251Q9BRH9 671 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 C11orf54Q9H0W9 315 aaPredicted RBP14.91□□□□□ -0.02
TRIM56-202ENST00000412507 LIN7CQ9NUP9 197 aaKnown RBP14.91□□□□□ -0.02
TRIM56-202ENST00000412507 PIPOXQ9P0Z9 390 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 LINC00527Q9UJ94 153 aa14.91□□□□□ -0.02
TRIM56-202ENST00000412507 ELF5Q9UKW6 265 aaPredicted RBP14.91□□□□□ -0.02
TRIM56-202ENST00000412507 A0A1W2PRX2 142 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 PSMB11A5LHX3 300 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 LINC01548A6NM66 108 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 SERPINE3A8MV23 424 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 ITGB1BP1O14713 200 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 RAB29O14966 203 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 ARFRP1Q13795 201 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 EDARADDQ8WWZ3 215 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 AGMATQ9BSE5 352 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 VCX3AQ9NNX9 186 aa14.9□□□□□ -0.02
TRIM56-202ENST00000412507 ZNF230Q9UIE0 474 aaPredicted RBP14.9□□□□□ -0.02
TRIM56-202ENST00000412507 TCRBV4S1A1TA0A5B7 111 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 FABP7O15540 132 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 GSTT2P0CG29 244 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 GSTT2BP0CG30 244 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 TGFBR1P36897 503 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 CDNFQ49AH0 187 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 IGSF11Q5DX21 431 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 FAM71F2Q6NXP2 309 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 ZNF329Q86UD4 541 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 FAM71E2Q8N5Q1 922 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 OR4X2Q8NGF9 303 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 OR8H1Q8NGG4 311 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 OR4A4PQ8NGN8 299 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 R3HDM4Q96D70 268 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 RITA1Q96K30 269 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 RASL11BQ9BPW5 248 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 ABCG5Q9H222 651 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 RNF150Q9ULK6 438 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 NOTCH3Q9UM47 2321 aa14.89□□□□□ -0.03
TRIM56-202ENST00000412507 BET1O15155 118 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 TALDO1P37837 337 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 GPR12P47775 334 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 ACTBP60709 375 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 KIR2DS1Q14954 304 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 MMDQ15546 238 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 IDNKQ5T6J7 187 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 GLDNQ6ZMI3 551 aaPredicted RBP14.88□□□□□ -0.03
TRIM56-202ENST00000412507 OR5H6Q8NGV6 325 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 CHPT1Q8WUD6 406 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 YIPF6Q96EC8 236 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 RDH8Q9NYR8 311 aa14.88□□□□□ -0.03
TRIM56-202ENST00000412507 AIREO43918 545 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 OPN1MWP04001 364 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 CT45A6P0DMU7 189 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 CT45A5P0DMU8 189 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 CT45A7P0DMV0 189 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 OPN1MW2P0DN77 364 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 OPN1MW3P0DN78 364 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 CNTFRP26992 372 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 ARL6IP1Q15041 203 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 TIMM50Q3ZCQ8 353 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 KHDC1LQ5JSQ8 128 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 FAM131AQ6UXB0 335 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 FOXRED2Q8IWF2 684 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 OR4F17Q8NGA8 305 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 OR4F4Q96R69 305 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 CABLES2Q9BTV7 478 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 GHITMQ9H3K2 345 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIM56-202ENST00000412507 RHBDL2Q9NX52 303 aa14.87□□□□□ -0.03
TRIM56-202ENST00000412507 TSSC4Q9Y5U2 329 aaPredicted RBP14.87□□□□□ -0.03
TRIM56-202ENST00000412507 SERPINB10P48595 397 aa14.86□□□□□ -0.03
TRIM56-202ENST00000412507 LSM3P62310 102 aaKnown RBP14.86□□□□□ -0.03
TRIM56-202ENST00000412507 STPG2Q8N412 459 aa14.86□□□□□ -0.03
TRIM56-202ENST00000412507 PHF21AQ96BD5 680 aa14.86□□□□□ -0.03
TRIM56-202ENST00000412507 HSPB9Q9BQS6 159 aa14.86□□□□□ -0.03
TRIM56-202ENST00000412507 TOLLIPQ9H0E2 274 aa14.86□□□□□ -0.03
TRIM56-202ENST00000412507 ZNF221Q9UK13 617 aa14.86□□□□□ -0.03
TRIM56-202ENST00000412507 IGKV1D-8A0A087WSZ0 117 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 TRBV6-7A0A0A0MS04 114 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 TMEM235A6NFC5 223 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 TRIM64CA6NLI5 447 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 AP4M1O00189 453 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 KCNAB3O43448 404 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 PROP1O75360 226 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 SOX6P35712 828 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 DEFA6Q01524 100 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 HACD4Q5VWC8 232 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 OR10J5Q8NHC4 309 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 NUDCD2Q8WVJ2 157 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 ETV7Q9Y603 341 aa14.85□□□□□ -0.03
TRIM56-202ENST00000412507 OR5H14A6NHG9 310 aa14.84□□□□□ -0.03
TRIM56-202ENST00000412507 H0YJW9 148 aa14.84□□□□□ -0.03
TRIM56-202ENST00000412507 NBR2O15453 112 aa14.84□□□□□ -0.03
TRIM56-202ENST00000412507 SCGNO76038 276 aa14.84□□□□□ -0.03
TRIM56-202ENST00000412507 GSTP1P09211 210 aaKnown RBP14.84□□□□□ -0.03
TRIM56-202ENST00000412507 DTYMKP23919 212 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms