RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 RSPO1Q2MKA7 263 aaPredicted RBP14.56□□□□□ -0.08
PTPRA-205ENST00000399903 SGMS2Q8NHU3 365 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 OXGR1Q96P68 337 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 UCN2Q96RP3 112 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 ULBP2Q9BZM5 246 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 LAMA5O15230 3695 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 SPTBN2O15020 2390 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 TRAV1-1A0A0B4J248 108 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 LAMTOR5O43504 91 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 CISD2Q8N5K1 135 aaKnown RBP14.56□□□□□ -0.08
PTPRA-205ENST00000399903 ERRFI1Q9UJM3 462 aaPredicted RBP14.56□□□□□ -0.08
PTPRA-205ENST00000399903 SYNGR2O43760 224 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 RBMXL2O75526 392 aaKnown RBP14.56□□□□□ -0.08
PTPRA-205ENST00000399903 C1QTNF9P0C862 333 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 CBLN1P23435 193 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 ADMP35318 185 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 HBG1P69891 147 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 HBG2P69892 147 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 COL5A1-AS1Q5SY13 56 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 ZNF525Q8N782 197 aa14.56□□□□□ -0.08
PTPRA-205ENST00000399903 Q6ZWC4 215 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 ZNF611Q8N823 705 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 TMEM106BQ9NUM4 274 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 RNF24Q9Y225 148 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 RNF115Q9Y4L5 304 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 A0A0U1RQV5 110 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 DUXBA0A1W2PPF3 345 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 HS3ST1O14792 307 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 TGFBR3Q03167 851 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 SPSB1Q96BD6 273 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 RASL10BQ96S79 203 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 PYGO2Q9BRQ0 406 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 DERL1Q9BUN8 251 aa14.55□□□□□ -0.08
PTPRA-205ENST00000399903 S100GP29377 79 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 SPINK9Q5DT21 86 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 ZNF468Q5VIY5 522 aaPredicted RBP14.54□□□□□ -0.08
PTPRA-205ENST00000399903 MBD3L1Q8WWY6 194 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 OIT3Q8WWZ8 545 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 RDH5Q92781 318 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 GTF3C1Q12789 2109 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 PDLIM4P50479 330 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 ZXDAP98168 799 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 OR10G9Q8NGN4 311 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 OR10G7Q8NGN6 311 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 DOCK7Q96N67 2140 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 PGLYRP1O75594 196 aaPredicted RBP14.54□□□□□ -0.08
PTPRA-205ENST00000399903 ZFAND5O76080 213 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 TPPP2P59282 170 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 SLC38A11Q08AI6 406 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 SP5Q6BEB4 398 aaPredicted RBP14.54□□□□□ -0.08
PTPRA-205ENST00000399903 HS3ST6Q96QI5 342 aa14.54□□□□□ -0.08
PTPRA-205ENST00000399903 CBY3A6NI87 242 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 SERF1AO75920 110 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 SERPINA7P05543 415 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 PLPPR5Q32ZL2 321 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 ATOH7Q8N100 152 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 IGLV3-12A0A075B6K2 115 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 CLEC18AA5D8T8 446 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 C11orf94C9JXX5 98 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 B4GALT1P15291 398 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 GAGE1Q13065 139 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 FFAR4Q5NUL3 377 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 CLEC18CQ8NCF0 446 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 TAF15Q92804 592 aaKnown RBP eCLIP14.53□□□□□ -0.08
PTPRA-205ENST00000399903 RAB40CQ96S21 281 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 LOC102724200A0A096LPH7 203 aaPredicted RBP14.53□□□□□ -0.08
PTPRA-205ENST00000399903 F2Z2F3 143 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 DHHO43323 396 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 WDR1O75083 606 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 NDUFB4O95168 129 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 UCP1P25874 307 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 RBM11P57052 281 aaKnown RBP14.53□□□□□ -0.08
PTPRA-205ENST00000399903 ACSM6Q6P461 480 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 HAPLN4Q86UW8 402 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 OR1L6Q8NGR2 347 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 ANAPC16Q96DE5 110 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 RNF150Q9ULK6 438 aa14.53□□□□□ -0.08
PTPRA-205ENST00000399903 RAET1LQ5VY80 246 aa14.52□□□□□ -0.08
PTPRA-205ENST00000399903 Q6ZN92 141 aa14.52□□□□□ -0.08
PTPRA-205ENST00000399903 NUFIP2Q7Z417 695 aaKnown RBP14.52□□□□□ -0.08
PTPRA-205ENST00000399903 NEIL1Q96FI4 390 aaPredicted RBP14.52□□□□□ -0.08
PTPRA-205ENST00000399903 TNFSF13O75888 250 aa14.52□□□□□ -0.09
PTPRA-205ENST00000399903 UMODP07911 640 aa14.52□□□□□ -0.09
PTPRA-205ENST00000399903 PTGDSP41222 190 aa14.52□□□□□ -0.09
PTPRA-205ENST00000399903 HINT1P49773 126 aaPredicted RBP14.52□□□□□ -0.09
PTPRA-205ENST00000399903 LHFPL2Q6ZUX7 228 aa14.52□□□□□ -0.09
PTPRA-205ENST00000399903 ALKBH3Q96Q83 286 aaPredicted RBP14.52□□□□□ -0.09
PTPRA-205ENST00000399903 WDR61Q9GZS3 305 aaKnown RBP14.52□□□□□ -0.09
PTPRA-205ENST00000399903 TMEM265A0A087WTH1 108 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 NPIPB13A6NJU9 1138 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 NPIPB4C9JG80 1138 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 NAPSAO96009 420 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 IGHV3-9P01782 118 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 OR5G3P0C626 314 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 CRISP2P16562 243 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 PMCHP20382 165 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 F2RP25116 425 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 TMEM211Q6ICI0 200 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 MCEMP1Q8IX19 187 aa14.51□□□□□ -0.09
PTPRA-205ENST00000399903 ADPRHL1Q8NDY3 354 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms