RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 IL36RNQ9UBH0 155 aa9.97□□□□□ -0.81
UBE2D3-209ENST00000394804 IGHV3-43A0A0B4J1X8 118 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 VSTM5A8MXK1 200 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 FAM90A26D6RGX4 464 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 M0R1X1 148 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 IGHV3-43DP0DP04 118 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 HOXA5P20719 270 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 OR2J1Q9GZK6 312 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 ARRDC1-AS1Q9H2J1 176 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 NCOA6Q14686 2063 aaPredicted RBP9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 PCDH15Q96QU1 1955 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 A0A087X0M5 115 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 A0A1B0GW64 132 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 A0A1B0GX30 115 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 DEFB108AA8MXU0 73 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 FCGR3BO75015 233 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 TNFSF4P23510 183 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 ICAM4Q14773 271 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 BTNL3Q6UXE8 466 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 C16orf82Q7Z2V1 217 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 FGFRL1Q8N441 504 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 OR5P3Q8WZ94 311 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 MUCL1Q96DR8 90 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 PLPPR2Q96GM1 343 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 RCC1LQ96I51 464 aaKnown RBP9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 GLRX2Q9NS18 164 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 CLN8Q9UBY8 286 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 TINAGQ9UJW2 476 aa9.96□□□□□ -0.81
UBE2D3-209ENST00000394804 C11orf94C9JXX5 98 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 DLL1O00548 723 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 PAGE4O60829 102 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 CCL11P51671 97 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 SPEM2Q0P670 501 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 ZNF766Q5HY98 468 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 DCAF10Q5QP82 559 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 HEPN1Q6WQI6 88 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 Q8WTZ3 238 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 TRBV23-1A0A0A0MS06 115 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 PROB1E7EW31 1015 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 K7ESF4 209 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 TRGC1P0CF51 173 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 ASCL4Q6XD76 172 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 SLC25A40Q8TBP6 338 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 TRAPPC1Q9Y5R8 145 aa9.96□□□□□ -0.82
UBE2D3-209ENST00000394804 CACNA1HO95180 2353 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 C21orf140B9A014 251 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 IGLV3-1P01715 115 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 HNF1AP20823 631 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 HOXA6P31267 233 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 PMS2P11Q13670 270 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 TRAT1Q6PIZ9 186 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 CORO2AQ92828 525 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 ZDHHC11Q9H8X9 412 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 MPLP40238 635 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 PKIAP61925 76 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 HGFACQ04756 655 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 IQCJQ1A5X6 159 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 FAM78BQ5VT40 261 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 GGNQ86UU5 652 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 CXXC4Q9H2H0 198 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 DMDP11532 3685 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 PGA5P0DJD9 388 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 TMEM105Q8N8V8 129 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 SARAFQ96BY9 339 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 LIME1Q9H400 295 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 RBKSQ9H477 322 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 DECR2Q9NUI1 292 aa9.95□□□□□ -0.82
UBE2D3-209ENST00000394804 A0A1W2PPE3 182 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 TMEM210A6NLX4 147 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 BMP5P22003 454 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 TNFRSF9Q07011 255 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 RSPO1Q2MKA7 263 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 R3HDM4Q96D70 268 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 WDR61Q9GZS3 305 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 TREM2Q9NZC2 230 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 KLF2Q9Y5W3 355 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 TMEM131Q92545 1883 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 FOXI3A8MTJ6 420 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 GYPAP02724 150 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 GABRA6Q16445 453 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 C1orf210Q8IVY1 113 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 DRAM1Q8N682 238 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 GTF3AQ92664 365 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 HES7Q9BYE0 225 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 MRPS18CQ9Y3D5 142 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 SP1P08047 785 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 AESQ08117 197 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 BATFQ16520 125 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 SRSF7Q16629 238 aaKnown RBP eCLIP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 NMSQ5H8A3 153 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 ZNF705AQ6ZN79 300 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 SCCPDHQ8NBX0 429 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 SSC4DQ8WTU2 575 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 HSD17B10Q99714 261 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 FUT9Q9Y231 359 aa9.94□□□□□ -0.82
UBE2D3-209ENST00000394804 SOX15O60248 233 aa9.93□□□□□ -0.82
UBE2D3-209ENST00000394804 MT-CO3P00414 261 aa9.93□□□□□ -0.82
UBE2D3-209ENST00000394804 FAM3BP58499 235 aaPredicted RBP9.93□□□□□ -0.82
UBE2D3-209ENST00000394804 CDCP2Q5VXM1 449 aa9.93□□□□□ -0.82
UBE2D3-209ENST00000394804 C1QL4Q86Z23 238 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms