RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 MOSP00540 346 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 AMY1AP04745 511 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 AMY2AP04746 511 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 SERPINB10P48595 397 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 ZNF134P52741 427 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 TMEM50BP56557 158 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 OR10A3P58181 314 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 HLA-DRB3P79483 266 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 DIAPH2-AS1Q14236 149 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 LYG1Q8N1E2 194 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 C5orf56Q8N8D9 126 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 OR52L2PQ8NGH6 319 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 SETD6Q8TBK2 473 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 RAB3CQ96E17 227 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 ARHGAP5-AS1Q96IT6 56 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 EAF1Q96JC9 268 aaPredicted RBP8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 PECRQ9BY49 303 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 Q9N2K0 584 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 PIPOXQ9P0Z9 390 aa8.29□□□□□ -1.08
SMARCA4-209ENST00000586122 A0A087WXM4 84 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 RAB29O14966 203 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 SLC31A2O15432 143 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 OPN1MWP04001 364 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 CD3GP09693 182 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 OPN1MW2P0DN77 364 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 OPN1MW3P0DN78 364 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 ZBTB25P24278 435 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 PPP1CCP36873 323 aaKnown RBP8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 REG1BP48304 166 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 GNMTQ14749 295 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 KIR2DS1Q14954 304 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 NEDD8Q15843 81 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 PLAC9Q5JTB6 97 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 CENPVQ7Z7K6 275 aaPredicted RBP8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 FOXRED2Q8IWF2 684 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 Q8N6K4 173 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 OR4F17Q8NGA8 305 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 OR4X2Q8NGF9 303 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 OR10R2Q8NGX6 335 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 IL1F10Q8WWZ1 152 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 OR4F4Q96R69 305 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 S1PR3Q99500 378 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 LIN7CQ9NUP9 197 aaKnown RBP8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 SLC23A1Q9UHI7 598 aa8.28□□□□□ -1.08
SMARCA4-209ENST00000586122 TRDCB7Z8K6 153 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 RAB27BO00194 218 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 MFNGO00587 321 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 HSPA12AO43301 675 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 KCNAB3O43448 404 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 HIST1H1DP16402 221 aaKnown RBP8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 CD36P16671 472 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 LSAMPQ13449 338 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 SRSF7Q16629 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 C9orf152Q5JTZ5 239 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 Q6ZS46 218 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 ZNF833PQ6ZTB9 187 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 CROCCP3Q8IVE0 287 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 COMMD1Q8N668 190 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 OR5AU1Q8NGC0 362 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 OR4A4PQ8NGN8 299 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 CHPT1Q8WUD6 406 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 CHCHD6Q9BRQ6 235 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 GON7Q9BXV9 100 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 IFI27L2Q9H2X8 130 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 TRRAPQ9Y4A5 3859 aa8.27□□□□□ -1.09
SMARCA4-209ENST00000586122 PLXNB1O43157 2135 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 SAA2-SAA4A0A096LPE2 208 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 IGHV3-72A0A0B4J1Y9 119 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 NCBP2LA6PVI3 153 aaKnown RBP8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 TSPAN15O95858 294 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 IGHG2P01859 326 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 SAA2P0DJI9 122 aaPredicted RBP8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 SLC35B1P78383 322 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 PITPNAQ00169 270 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 CD83Q01151 205 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 HNF4GQ14541 408 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 TMEM95Q3KNT9 176 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 FBLN7Q53RD9 439 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 FAM53AQ6NSI3 398 aaPredicted RBP8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 SFXN4Q6P4A7 337 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 Q6ZPA2 131 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 Q6ZS49 121 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 SLC35E3Q7Z769 313 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 NR2C2APQ86WQ0 139 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 ODF3L1Q8IXM7 274 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 TSPAN14Q8NG11 270 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 HDHD3Q9BSH5 251 aaPredicted RBP8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 TOLLIPQ9H0E2 274 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 ATG5Q9H1Y0 275 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 ABCG5Q9H222 651 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 OR51E2Q9H255 320 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 ZNF580Q9UK33 172 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 KCNK7Q9Y2U2 307 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 ETV7Q9Y603 341 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 NOTCH3Q9UM47 2321 aa8.26□□□□□ -1.09
SMARCA4-209ENST00000586122 A0A0A6YYH2 397 aa8.25□□□□□ -1.09
SMARCA4-209ENST00000586122 LOC100506127A0A0U1RQW1 187 aa8.25□□□□□ -1.09
SMARCA4-209ENST00000586122 PSMB11A5LHX3 300 aa8.25□□□□□ -1.09
SMARCA4-209ENST00000586122 OR5H14A6NHG9 310 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms