RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 DFFBO76075 338 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 SULT1A1P50225 295 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 AESQ08117 197 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 MSMO1Q15800 293 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 HFEQ30201 348 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 SMIM21Q3B7S5 101 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 Q6ZS92 163 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 TMEM217Q8N7C4 229 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 OR1L1Q8NH94 360 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 FAM213BQ8TBF2 198 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 PBDC1Q9BVG4 233 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 MSL2Q9HCI7 577 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 FZR1Q9UM11 496 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 PTBP3O95758 552 aaKnown RBP13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 CTRB1P17538 263 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 IL2RGP31785 369 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 PPT1P50897 306 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 PAX5Q02548 391 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 EIF4EBP1Q13541 118 aaPredicted RBP13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 EIF2S3LQ2VIR3 472 aaKnown RBP13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 CTRB2Q6GPI1 263 aa13.85□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 SYNGR2O43760 224 aa13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 HBZP02008 142 aa13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 ZNF16P17020 682 aaPredicted RBP13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 IZUMO4Q1ZYL8 232 aa13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 KDF1Q8NAX2 398 aaPredicted RBP13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 EIF5A2Q9GZV4 153 aaKnown RBP13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 SMDT1Q9H4I9 107 aa13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 UFSP2Q9NUQ7 469 aa13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 COA4Q9NYJ1 87 aa13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 CACNA1DQ01668 2161 aa13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 ASPMQ8IZT6 3477 aa13.84□□□□□ -0.19
APOC4-APOC2-201ENST00000585685 ATP6V1G2-DDX39BF2Z307 99 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 NFYBP25208 207 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 PPP1CCP36873 323 aaKnown RBP13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 GABRA2P47869 451 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 HOXA4Q00056 320 aaPredicted RBP13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 COL10A1Q03692 680 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 SP5Q6BEB4 398 aaPredicted RBP13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 LURAP1Q96LR2 239 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 HIPK2Q9H2X6 1198 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 RFNGQ9Y644 331 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 USF3Q68DE3 2245 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 BTBD17A6NE02 478 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 FAM90A26D6RGX4 464 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 TAS2R30P59541 319 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 C3orf36Q3SXR2 165 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 KRBOX4Q5JUW0 171 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 TIMM23BQ5SRD1 257 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 DPPA3Q6W0C5 159 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 FGFRL1Q8N441 504 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 OR52L2PQ8NGH6 319 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 OR2D2Q9H210 308 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 FAM215AQ9Y5M1 114 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 MMP24Q9Y5R2 645 aa13.83□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 PRRC2CQ9Y520 2896 aaKnown RBP13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 MED19A0JLT2 244 aaPredicted RBP13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 H3BP45 60 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 H7C2Y5 167 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 TM4SF5O14894 197 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 FLI1Q01543 452 aaPredicted RBP13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 SPSB3Q6PJ21 355 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 OR10Z1Q8NGY1 313 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 MRGPRDQ8TDS7 321 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 LRRC29Q8WV35 223 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 NINJ1Q92982 152 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 ABHD14AQ9BUJ0 271 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 DIDO1Q9BTC0 2240 aaKnown RBP13.82□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 NBL1P41271 181 aa13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 RUNX1Q01196 453 aa13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 CATR1Q13166 79 aa13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 TRAT1Q6PIZ9 186 aa13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 ZNF474Q6S9Z5 364 aaPredicted RBP13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 C5orf30Q96GV9 206 aa13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 SEBOXQ9HB31 216 aaPredicted RBP13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 PSENENQ9NZ42 101 aa13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 WASF3Q9UPY6 502 aa13.81□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 SRRM5B3KS81 715 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 IFNA5P01569 189 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 TFF1P04155 84 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 PAX6P26367 422 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 TIMP3P35625 211 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 CFHR2P36980 270 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 GLIPR1P48060 266 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 TMEM267Q0VDI3 215 aaPredicted RBP13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 MSMPQ1L6U9 139 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 AKR1C8PQ5T2L2 129 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 C1orf185Q5T7R7 199 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 FAM90A1Q86YD7 464 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 CD177Q8N6Q3 437 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 TCTEX1D1Q8N7M0 179 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 OR2Z1Q8NG97 314 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 AIFM2Q9BRQ8 373 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 SLC35B3Q9H1N7 401 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 GPR37O15354 613 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 IGHV3-13P01766 116 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 P0C879 139 aa13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 RPL30P62888 115 aaKnown RBP13.8□□□□□ -0.2
APOC4-APOC2-201ENST00000585685 RBMXL3Q8N7X1 1067 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms