RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 GATA3P23771 443 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 GZMKP49863 264 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 RAB7AP51149 207 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 LUMP51884 338 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 FXYD4P59646 89 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MSMO1Q15800 293 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 TMEM249Q2WGJ8 235 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 METTL11BQ5VVY1 283 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 PLET1Q6UQ28 207 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SLC38A6Q8IZM9 456 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 CENPSQ8N2Z9 138 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 UPRTQ96BW1 309 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ABHD14AQ9BUJ0 271 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SUCNR1Q9BXA5 334 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 LPAR2Q9HBW0 351 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 NUDT15Q9NV35 164 aa13.69□□□□□ -0.22
CDK5RAP3-215ENST00000579780 VPS13CQ709C8 3753 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 IGKV1D-13A0A0B4J2D9 117 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 IGKV1-13P0DP09 117 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MMP9P14780 707 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 PGAM2P15259 253 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SPNP16150 400 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 PRTN3P24158 256 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ARF6P62330 175 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 FAM53AQ6NSI3 398 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 CCBE1Q6UXH8 406 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SLC25A48Q6ZT89 311 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 GLCCI1Q86VQ1 547 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 LINC00311Q8N616 119 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ZNF596Q8TC21 504 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MARCH1Q8TCQ1 289 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 TNFRSF14Q92956 283 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 TOMM40LQ969M1 308 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 TMEM186Q96B77 213 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 IFI27L2Q9H2X8 130 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 VSIG4Q9Y279 399 aa13.68□□□□□ -0.22
CDK5RAP3-215ENST00000579780 IGHV2-26A0A0B4J1V2 119 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 CTSDP07339 412 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 RAG2P55895 527 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 PAX8Q06710 450 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 NCR3LG1Q68D85 454 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 LPCAT3Q6P1A2 487 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 LDLRAD3Q86YD5 345 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 OR13D1Q8NGV5 346 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 OR9G1Q8NH87 305 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ZFAND1Q8TCF1 268 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SECTM1Q8WVN6 248 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MARVELD1Q9BSK0 173 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 CLEC7AQ9BXN2 247 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SLC5A7Q9GZV3 580 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 OR2D2Q9H210 308 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 GPR132Q9UNW8 380 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 PSG11Q9UQ72 335 aa13.67□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MED13LQ71F56 2210 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ITPR3Q14573 2671 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ARPC1BO15143 372 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SLC31A2O15432 143 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ST8SIA5O15466 376 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SLC22A5O76082 557 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 OR8U9P0C7N5 309 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 GNG10P50151 68 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MECP2P51608 486 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 TAS2R31P59538 309 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 BAMBIQ13145 260 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 UTF1Q5T230 341 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 DCAF12L2Q5VW00 463 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 VMO1Q7Z5L0 202 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ZNF645Q8N7E2 425 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MAPK1IP1LQ8NDC0 245 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 BEND2Q8NDZ0 799 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 OR8U1Q8NH10 309 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 AGMATQ9BSE5 352 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 RSRP1Q9BUV0 290 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MMP28Q9H239 520 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 GHITMQ9H3K2 345 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 C5orf66Q9H5L9 145 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 HEXA-AS1Q9H8Q6 139 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 SIRT7Q9NRC8 400 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 KCNS2Q9ULS6 477 aa13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 C14orf166Q9Y224 244 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 RBM7Q9Y580 266 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-215ENST00000579780 CSMD1Q96PZ7 3565 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 TRAV6A0A075B6T7 132 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 J3QLI3 93 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 J3QR06 171 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 GPR31O00270 319 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 PEX14O75381 377 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 TOX4O94842 621 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 H2AFB2P0C5Z0 115 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 CT45A1Q5HYN5 189 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 ZBTB34Q8NCN2 500 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 OR11H6Q8NGC7 330 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 CT45A3Q8NHU0 189 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 LEAP2Q969E1 77 aa13.65□□□□□ -0.22
CDK5RAP3-215ENST00000579780 MSI2Q96DH6 328 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms