RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 LY6G6FQ5SQ64 297 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 VAX1Q5SQQ9 334 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 RNLSQ5VYX0 342 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 ODF3L1Q8IXM7 274 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 OR2AK2Q8NG84 335 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 OR5M8Q8NGP6 311 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 C4orf3Q8WVX3 66 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 RBMXL1Q96E39 390 aaKnown RBP11.1□□□□□ -0.63
SNX6-210ENST00000557341 YPEL2Q96QA6 119 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 SULT4A1Q9BR01 284 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 MRPL20Q9BYC9 149 aaKnown RBP11.1□□□□□ -0.63
SNX6-210ENST00000557341 ABRACLQ9P1F3 81 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 LRRC42Q9Y546 428 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 SAA2-SAA4A0A096LPE2 208 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 SAA2P0DJI9 122 aaPredicted RBP11.09□□□□□ -0.63
SNX6-210ENST00000557341 PSMB8P28062 276 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 ACTBP60709 375 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 DGCR2P98153 550 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 KIR2DS1Q14954 304 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 SPHARQ15513 63 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 MED22Q15528 200 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 HSD17B12Q53GQ0 312 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 C1orf100Q5SVJ3 147 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 OR10K2Q6IF99 312 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 ZNF833PQ6ZTB9 187 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 MOB1BQ7L9L4 216 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 C6orf201Q7Z4U5 140 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 LRRTM1Q86UE6 522 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 SVOPQ8N4V2 548 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 KCNG3Q8TAE7 436 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 IL1F10Q8WWZ1 152 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 KCTD7Q96MP8 289 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 B9D2Q9BPU9 175 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 NABP2Q9BQ15 211 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 ZNF251Q9BRH9 671 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 CHCHD6Q9BRQ6 235 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 TM2D1Q9BX74 207 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 CHMP1AQ9HD42 196 aaPredicted RBP11.09□□□□□ -0.63
SNX6-210ENST00000557341 STEAP1Q9UHE8 339 aa11.09□□□□□ -0.63
SNX6-210ENST00000557341 LSM2Q9Y333 95 aaKnown RBP11.09□□□□□ -0.63
SNX6-210ENST00000557341 PTGES3LE9PB15 166 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 NBR2O15453 112 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 RAMP3O60896 148 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 HLA-DRB1P01911 266 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 HTR2CP28335 458 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 UNC119Q13432 240 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 C5orf24Q7Z6I8 188 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 OR6M1Q8NGM8 313 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 NICN1Q9BSH3 213 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 FAAP24Q9BTP7 215 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 IFI27L2Q9H2X8 130 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 KCNK15Q9H427 330 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 SCN3BQ9NY72 215 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 KIAA1456Q9P272 454 aa11.08□□□□□ -0.64
SNX6-210ENST00000557341 SLC22A1O15245 554 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 ATP6V0E1O15342 81 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 BPNT1O95861 308 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 NAPSAO96009 420 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 UCHL1P09936 223 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 SRMP19623 302 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 CNTFRP26992 372 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 OR3A3P47888 321 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 LUMP51884 338 aaPredicted RBP11.07□□□□□ -0.64
SNX6-210ENST00000557341 FHL3Q13643 280 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 TMEM65Q6PI78 240 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 CEACAM19Q7Z692 300 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 SETD6Q8TBK2 473 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 MYOZ3Q8TDC0 251 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 UFD1Q92890 307 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 PARP11Q9NR21 331 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 PIPOXQ9P0Z9 390 aa11.07□□□□□ -0.64
SNX6-210ENST00000557341 IGHV7-81A0A0B4J1V7 117 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 TMEM14DPA8MWL7 114 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 RAB29O14966 203 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 ST8SIA5O15466 376 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 NDUFA3O95167 84 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 BLVRBP30043 206 aaPredicted RBP11.06□□□□□ -0.64
SNX6-210ENST00000557341 PPIFP30405 207 aaKnown RBP11.06□□□□□ -0.64
SNX6-210ENST00000557341 C5orf64Q2M2E5 130 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 LIPKQ5VXJ0 399 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 ZNF880Q6PDB4 577 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 FAM131AQ6UXB0 335 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 URM1Q9BTM9 101 aaKnown RBP11.06□□□□□ -0.64
SNX6-210ENST00000557341 ANKRD60Q9BZ19 345 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 OR51J1Q9H342 316 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 PLEKHJ1Q9NW61 149 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 TENM3Q9P273 2699 aa11.06□□□□□ -0.64
SNX6-210ENST00000557341 TRAV41A0A0B4J266 112 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 OR5H14A6NHG9 310 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 SEC14L6B5MCN3 397 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 G3V318 75 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 QRFPP83859 136 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 IRF3Q14653 427 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 LIN54Q6MZP7 749 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms