RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 MS4A10Q96PG2 267 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 ABHD14AQ9BUJ0 271 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 TAF9BQ9HBM6 251 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 SPACA1Q9HBV2 294 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 ERVK13-1Q9NX77 482 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 RCC2Q9P258 522 aaKnown RBP9.43□□□□□ -0.9
SNX6-209ENST00000557265 FCN1O00602 326 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 NDUFA3O95167 84 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 FADS2O95864 444 aaKnown RBP9.42□□□□□ -0.9
SNX6-209ENST00000557265 EGR2P11161 476 aaPredicted RBP9.42□□□□□ -0.9
SNX6-209ENST00000557265 BDKRB2P30411 391 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 TPPP2P59282 170 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 ACTBL2Q562R1 376 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 RAB12Q6IQ22 244 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 TRAT1Q6PIZ9 186 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 ZNF833PQ6ZTB9 187 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 C5orf24Q7Z6I8 188 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 GAPTQ8N292 157 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 ORAI1Q96D31 301 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 RHOVQ96L33 236 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 FBXL15Q9H469 300 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 AMBNQ9NP70 447 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 NUBP2Q9Y5Y2 271 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 PEX16Q9Y5Y5 336 aa9.42□□□□□ -0.9
SNX6-209ENST00000557265 SAA2-SAA4A0A096LPE2 208 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 ARPC1BO15143 372 aaKnown RBP9.41□□□□□ -0.9
SNX6-209ENST00000557265 SAA2P0DJI9 122 aaPredicted RBP9.41□□□□□ -0.9
SNX6-209ENST00000557265 TMEM267Q0VDI3 215 aaPredicted RBP9.41□□□□□ -0.9
SNX6-209ENST00000557265 RAB40BQ12829 278 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 GPR176Q14439 515 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 PLGLAQ15195 96 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 ZIK1Q3SY52 487 aaPredicted RBP9.41□□□□□ -0.9
SNX6-209ENST00000557265 PYHIN1Q6K0P9 492 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 CD200R1LQ6Q8B3 271 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 PPP1R27Q86WC6 154 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 ZNF184Q99676 751 aaPredicted RBP9.41□□□□□ -0.9
SNX6-209ENST00000557265 FAM103A1Q9BTL3 118 aaKnown RBP9.41□□□□□ -0.9
SNX6-209ENST00000557265 TMED9Q9BVK6 235 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 TUBA4BQ9H853 241 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 KCNIP1Q9NZI2 227 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 CNOT2Q9NZN8 540 aaKnown RBP9.41□□□□□ -0.9
SNX6-209ENST00000557265 JPT1Q9UK76 154 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 RNF150Q9ULK6 438 aa9.41□□□□□ -0.9
SNX6-209ENST00000557265 PLECQ15149 4684 aaKnown RBP9.4□□□□□ -0.9
SNX6-209ENST00000557265 UBE2QL1A1L167 161 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 RRHO14718 337 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 CA11O75493 328 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 GABRB1P18505 474 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 CD40LGP29965 261 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 RIPK1Q13546 671 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 AKIRIN2Q53H80 203 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 XAF1Q6GPH4 301 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 UNQ5815/PRO19632Q6UWF5 114 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 FAM131AQ6UXB0 335 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 LFNGQ8NES3 379 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 IL17DQ8TAD2 202 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 MRPS24Q96EL2 167 aaKnown RBP9.4□□□□□ -0.9
SNX6-209ENST00000557265 CYYR1Q96J86 154 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 RDH12Q96NR8 316 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 CLCC1Q96S66 551 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 RETNQ9HD89 108 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 MBNL3Q9NUK0 354 aaKnown RBP9.4□□□□□ -0.9
SNX6-209ENST00000557265 GAB2Q9UQC2 676 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 ORC6Q9Y5N6 252 aa9.4□□□□□ -0.9
SNX6-209ENST00000557265 H0Y980 276 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 YPEL1O60688 119 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 SC5DO75845 299 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 RGS11O94810 467 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 TRGV3P03979 118 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 MAS1P04201 325 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 ALPLP05186 524 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 HTD2P86397 168 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 C1orf146Q5VVC0 180 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 RPL22L1Q6P5R6 122 aaKnown RBP9.39□□□□□ -0.91
SNX6-209ENST00000557265 GLIPR1L1Q6UWM5 242 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 OR2AK2Q8NG84 335 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 OR52I1Q8NGK6 324 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 MUL1Q969V5 352 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 YPEL2Q96QA6 119 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 BANF2Q9H503 90 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 SLA2Q9H6Q3 261 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 RANGRFQ9HD47 186 aaPredicted RBP9.39□□□□□ -0.91
SNX6-209ENST00000557265 GMPPBQ9Y5P6 360 aa9.39□□□□□ -0.91
SNX6-209ENST00000557265 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
SNX6-209ENST00000557265 LIMS3P0CW19 117 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 LIMS4P0CW20 117 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 CT45A6P0DMU7 189 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 CT45A5P0DMU8 189 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 CT45A7P0DMV0 189 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 IGFBP3P17936 291 aaPredicted RBP9.38□□□□□ -0.91
SNX6-209ENST00000557265 FUT3P21217 361 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 ZP3P21754 424 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 KLF5Q13887 457 aaPredicted RBP9.38□□□□□ -0.91
SNX6-209ENST00000557265 CCDC58Q4VC31 144 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 ZNF562Q6V9R5 426 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 IL34Q6ZMJ4 242 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 ZNF554Q86TJ5 538 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 GTSCR1Q86UQ5 136 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 OR9G4Q8NGQ1 327 aa9.38□□□□□ -0.91
SNX6-209ENST00000557265 OR13C5Q8NGS8 318 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms