RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 STEAP3Q658P3 488 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 MOB1BQ7L9L4 216 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 TGIF2LXQ8IUE1 241 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 ODF3L1Q8IXM7 274 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 Q8N6K4 173 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 OR56B1Q8NGI3 324 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 IL1F10Q8WWZ1 152 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 EAF1Q96JC9 268 aaPredicted RBP16.28■□□□□ 0.2
VTI1B-205ENST00000555543 CITED2Q99967 270 aaPredicted RBP16.28■□□□□ 0.2
VTI1B-205ENST00000555543 STUB1Q9UNE7 303 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 YPEL1O60688 119 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 NSUN5P1Q3KNT7 163 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 KCTD21Q4G0X4 260 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 C10orf99Q6UWK7 81 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 YPEL2Q96QA6 119 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 PARP12Q9H0J9 701 aaKnown RBP16.27■□□□□ 0.2
VTI1B-205ENST00000555543 OR51E2Q9H255 320 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 C12orf4Q9NQ89 552 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 ABRACLQ9P1F3 81 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 RAB22AQ9UL26 194 aa16.27■□□□□ 0.2
VTI1B-205ENST00000555543 FGF16O43320 207 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 TXNL1O43396 289 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 LANCL1O43813 399 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 SLC2A2P11168 524 aaPredicted RBP16.26■□□□□ 0.19
VTI1B-205ENST00000555543 CD1BP29016 333 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 NEDD8Q15843 81 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 TCTEX1D4Q5JR98 221 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 LY6G6FQ5SQ64 297 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 OR5AU1Q8NGC0 362 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 RIMS4Q9H426 269 aaPredicted RBP16.26■□□□□ 0.19
VTI1B-205ENST00000555543 KCNK7Q9Y2U2 307 aa16.26■□□□□ 0.19
VTI1B-205ENST00000555543 RANBP1P43487 201 aa16.25■□□□□ 0.19
VTI1B-205ENST00000555543 HLA-DRB3P79483 266 aa16.25■□□□□ 0.19
VTI1B-205ENST00000555543 OR2T10Q8NGZ9 312 aa16.25■□□□□ 0.19
VTI1B-205ENST00000555543 IFI27L2Q9H2X8 130 aa16.25■□□□□ 0.19
VTI1B-205ENST00000555543 Q9N2K0 584 aa16.25■□□□□ 0.19
VTI1B-205ENST00000555543 OR1A1Q9P1Q5 309 aa16.25■□□□□ 0.19
VTI1B-205ENST00000555543 SAA2-SAA4A0A096LPE2 208 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 ST8SIA5O15466 376 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 RGS11O94810 467 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 MOSP00540 346 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 SAA2P0DJI9 122 aaPredicted RBP16.24■□□□□ 0.19
VTI1B-205ENST00000555543 OR3A3P47888 321 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 CD83Q01151 205 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 LSAMPQ13449 338 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 CENPVQ7Z7K6 275 aaPredicted RBP16.24■□□□□ 0.19
VTI1B-205ENST00000555543 NDUFA11Q86Y39 141 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 OR2AK2Q8NG84 335 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 CMSS1Q9BQ75 279 aaKnown RBP16.24■□□□□ 0.19
VTI1B-205ENST00000555543 MRPL20Q9BYC9 149 aaKnown RBP16.24■□□□□ 0.19
VTI1B-205ENST00000555543 RNF167Q9H6Y7 350 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 PLSCR3Q9NRY6 295 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 SSR3Q9UNL2 185 aa16.24■□□□□ 0.19
VTI1B-205ENST00000555543 RAB27BO00194 218 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 SCTP09683 121 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 RAB6AP20340 208 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 ZNF833PQ6ZTB9 187 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 Q8N9W7 124 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 OR10R2Q8NGX6 335 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 RAB3CQ96E17 227 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 NOL4LQ96MY1 436 aaPredicted RBP16.23■□□□□ 0.19
VTI1B-205ENST00000555543 CHCHD6Q9BRQ6 235 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 SLC23A1Q9UHI7 598 aa16.23■□□□□ 0.19
VTI1B-205ENST00000555543 IGKV1-6A0A0C4DH72 117 aa16.22■□□□□ 0.19
VTI1B-205ENST00000555543 NCBP2LA6PVI3 153 aaKnown RBP16.22■□□□□ 0.19
VTI1B-205ENST00000555543 NOTOA8MTQ0 251 aa16.22■□□□□ 0.19
VTI1B-205ENST00000555543 MFNGO00587 321 aa16.22■□□□□ 0.19
VTI1B-205ENST00000555543 GNB3P16520 340 aa16.22■□□□□ 0.19
VTI1B-205ENST00000555543 GADD45AP24522 165 aa16.22■□□□□ 0.19
VTI1B-205ENST00000555543 NABP2Q9BQ15 211 aa16.22■□□□□ 0.19
VTI1B-205ENST00000555543 LINC00527Q9UJ94 153 aa16.22■□□□□ 0.19
VTI1B-205ENST00000555543 A0A1W2PRX2 142 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 LINC01548A6NM66 108 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 IGHG2P01859 326 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 OPN1MWP04001 364 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 CLEC2LP0C7M8 214 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 OPN1MW2P0DN77 364 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 OPN1MW3P0DN78 364 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 HIST1H1DP16402 221 aaKnown RBP16.21■□□□□ 0.19
VTI1B-205ENST00000555543 F2RL1P55085 397 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 ZNF251Q9BRH9 671 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 MGAT4AQ9UM21 535 aa16.21■□□□□ 0.19
VTI1B-205ENST00000555543 A0A075B6Q4 140 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 LOC100506127A0A0U1RQW1 187 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 KCNAB3O43448 404 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 WIPF1O43516 503 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 FCGR3AP08637 254 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 CD3GP09693 182 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 CD36P16671 472 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 SDC2P34741 201 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 RPL39P5Q59GN2 51 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 SLC35E3Q7Z769 313 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 ZNF329Q86UD4 541 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 TPRA1Q86W33 373 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 FAM71E2Q8N5Q1 922 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 PTX4Q96A99 478 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 R3HDM4Q96D70 268 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 KCTD7Q96MP8 289 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 S1PR3Q99500 378 aa16.2■□□□□ 0.18
VTI1B-205ENST00000555543 AGMATQ9BSE5 352 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms