RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 HARBI1Q96MB7 349 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 HDHD3Q9BSH5 251 aaPredicted RBP6.57□□□□□ -1.36
LRP6-206ENST00000543091 TM2D1Q9BX74 207 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 GNB4Q9HAV0 340 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 RAB18Q9NP72 206 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 HILPDAQ9Y5L2 63 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.57□□□□□ -1.361e-7■■■■■ 28.1
LRP6-206ENST00000543091 C3orf85A0A1B0GTC6 90 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 ARPC5O15511 151 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 LANCL1O43813 399 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 ZNF260Q3ZCT1 412 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 PCSK4Q6UW60 755 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 SLC51BQ86UW2 128 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 NANPQ8TBE9 248 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 YIPF5Q969M3 257 aa6.57□□□□□ -1.36
LRP6-206ENST00000543091 ZMAT5Q9UDW3 170 aaKnown RBP6.57□□□□□ -1.36
LRP6-206ENST00000543091 PTPN13Q12923 2485 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 WDR87Q6ZQQ6 2873 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 TSPAN4O14817 238 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 SIGLEC5O15389 551 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 DFFBO76075 338 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 NQO2P16083 231 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 S100A11P31949 105 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 NTF4P34130 210 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 OR52L2PQ8NGH6 319 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 OR1L1Q8NH94 360 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 SCARB1Q8WTV0 552 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 LHX4Q969G2 390 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 STRAPQ9Y3F4 350 aaKnown RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 A0A1W2PN81 502 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 F12P00748 615 aaPredicted RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 CHRNA7P36544 502 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 LGALS7P47929 136 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 RPS11P62280 158 aaKnown RBP eCLIP6.56□□□□□ -1.36
LRP6-206ENST00000543091 DAZAP2Q15038 168 aaPredicted RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 ATPAF1Q5TC12 328 aaPredicted RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 ZNF546Q86UE3 836 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 HPSE2Q8WWQ2 592 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 BEX4Q9NWD9 120 aaPredicted RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 A0A1W2PPV4 95 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 YIF1AO95070 293 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 CT45A6P0DMU7 189 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 CT45A5P0DMU8 189 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 CT45A7P0DMV0 189 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 CT45A1Q5HYN5 189 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 ZNF66Q6ZN08 573 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 CT45A3Q8NHU0 189 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 PPP1R3EQ9H7J1 279 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 Q9N2K0 584 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 CCL28Q9NRJ3 127 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 DPM3Q9P2X0 92 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 WNK2Q9Y3S1 2297 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 IGKV1-9A0A0C4DH69 117 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 A0A1W2PPE3 182 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 ACAA1P09110 424 aaPredicted RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 TPT1P13693 172 aaKnown RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 BMI1P35226 326 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 TNXAQ16473 311 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 Q5PR19 223 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 FAM166AQ6J272 317 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 C1QL2Q7Z5L3 287 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 WDFY1Q8IWB7 410 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 DPF1Q92782 380 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 R3HDM4Q96D70 268 aa6.56□□□□□ -1.36
LRP6-206ENST00000543091 SEBOXQ9HB31 216 aaPredicted RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 PATZ1Q9HBE1 687 aaKnown RBP6.56□□□□□ -1.36
LRP6-206ENST00000543091 RCC1P18754 421 aaPredicted RBP6.55□□□□□ -1.36
LRP6-206ENST00000543091 VAX1Q5SQQ9 334 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 GLDNQ6ZMI3 551 aaPredicted RBP6.55□□□□□ -1.36
LRP6-206ENST00000543091 GAPTQ8N292 157 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 FBLN5Q9UBX5 448 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 KCNK7Q9Y2U2 307 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 WASHC3Q9Y3C0 194 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 F2RP25116 425 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 GRNP28799 593 aaKnown RBP6.55□□□□□ -1.36
LRP6-206ENST00000543091 REG1BP48304 166 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 SLC35B1P78383 322 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 DEFA5Q01523 94 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 PLA2G7Q13093 441 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 ZNF266Q14584 549 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 TMEM42Q69YG0 159 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 CYB5R2Q6BCY4 276 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 OR10P1Q8NGE3 313 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 OR1S2Q8NGQ3 325 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 C2orf50Q96LR7 162 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 GSX2Q9BZM3 304 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 METRNQ9UJH8 293 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 PRNDQ9UKY0 176 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 NUP210LQ5VU65 1888 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 KBTBD11-OT1A0A1B0GTJ5 212 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 RPL19P84098 196 aaKnown RBP6.55□□□□□ -1.36
LRP6-206ENST00000543091 SSX2Q16385 188 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 SP6Q3SY56 376 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 SPANXN5Q5MJ07 72 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 OR8G2PQ6IF36 304 aa6.55□□□□□ -1.36
LRP6-206ENST00000543091 TP53BP1Q12888 1972 aaPredicted RBP6.55□□□□□ -1.36
LRP6-206ENST00000543091 MFNGO00587 321 aa6.54□□□□□ -1.36
LRP6-206ENST00000543091 PLA2G10O15496 165 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms