RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CRYBB2P43320 205 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 GYG1P46976 350 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 RPL29P47914 159 aaKnown RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 CAV2P51636 162 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 HNRNPA3P51991 378 aaKnown RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 NDUFA6P56556 154 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TAS2R30P59541 319 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 SNRPFP62306 86 aaKnown RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 GNG3P63215 75 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 LCN2P80188 198 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 H3F3AP84243 136 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OC90Q02509 493 aaPredicted RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 ACVR1Q04771 509 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 ST3GAL3Q11203 375 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 MLLT11Q13015 90 aaPredicted RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 RUNX3Q13761 415 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 CLINT1Q14677 625 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 IL17AQ16552 155 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TIMM23BQ5SRD1 257 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 C1orf220Q5T0J3 134 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 HENMT1Q5T8I9 393 aaKnown RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 ZNF57Q68EA5 555 aaPredicted RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 CD200R1LQ6Q8B3 271 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 ALKAL2Q6UX46 152 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 SLC35E3Q7Z769 313 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TMEM183AQ8IXX5 376 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 PNKDQ8N490 385 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TCTEX1D1Q8N7M0 179 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 LRRC75AQ8NAA5 344 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 LFNGQ8NES3 379 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OR2T33Q8NG76 320 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OR51S1Q8NGJ8 323 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OR4A4PQ8NGN8 299 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OR2T35Q8NGX2 323 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OR6N1Q8NGY5 312 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OR5B3Q8NH48 314 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OR56B4Q8NH76 319 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 VN1R17PQ8TDU5 208 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 DOK4Q8TEW6 326 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 EEF1AKMT1Q8WVE0 214 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 OR8D1Q8WZ84 308 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 UBE2E3Q969T4 207 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TM4SF19Q96DZ7 209 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 SEH1LQ96EE3 360 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 ACY3Q96HD9 319 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 SLC35G5Q96KT7 338 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 GPR82Q96P67 336 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 HIST1H2BLQ99880 126 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 MICU1Q9BPX6 476 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 MRPL57Q9BQC6 102 aaKnown RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 ZNF649Q9BS31 505 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TM2D1Q9BX74 207 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TMEM126AQ9H061 195 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 RBKSQ9H477 322 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 GLIPR2Q9H4G4 154 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 PLEKHA1Q9HB21 404 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 SPANXB1Q9NS25 103 aaPredicted RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 CBLN4Q9NTU7 201 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TMEM100Q9NV29 134 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 MRPL16Q9NX20 251 aaKnown RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 BET1LQ9NYM9 111 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TAS2R8Q9NYW2 309 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 ZNF107Q9UII5 783 aaPredicted RBP2.47□□□□□ -2.01
USP28-210ENST00000542033 VPREB3Q9UKI3 123 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 TBX21Q9UL17 535 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 PSG8Q9UQ74 426 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 SIGLEC9Q9Y336 463 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 SNX10Q9Y5X0 201 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 SLX4Q8IY92 1834 aa2.47□□□□□ -2.01
USP28-210ENST00000542033 DLEC1Q9Y238 1755 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 LRP5O75197 1615 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 MON2Q7Z3U7 1717 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 A0A0J9YY10 115 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 LOC100130705A0A1B0GUX0 176 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 A0A1B0GX78 115 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 FRG2CA6NGY1 282 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 SMIM9A6NGZ8 99 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 SNRPGP15A8MWD9 76 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 C21orf140B9A014 251 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 E9PLD3 99 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 FCN1O00602 326 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 GNGT2O14610 69 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ERI3O43414 337 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 CXCL13O43927 109 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 GNG7O60262 68 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 MPZL2O60487 215 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 EIF4E2O60573 245 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 KBTBD11O94819 623 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 SIX6O95475 246 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 HAND1O96004 215 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 CST1P01037 141 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 HLA-AP01891 365 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 DBIP07108 87 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 OR5G3P0C626 314 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 HIST1H1EP10412 219 aaKnown RBP2.46□□□□□ -2.02
USP28-210ENST00000542033 FABP4P15090 132 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 CXCL2P19875 107 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 AZU1P20160 251 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ALOX5APP20292 161 aa2.46□□□□□ -2.02
USP28-210ENST00000542033 ATP6V0CP27449 155 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms