RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SLC39A9Q9NUM3 307 aa11.83□□□□□ -0.52
SCNN1A-215ENST00000540037 KIR2DS1A0A191URI9 304 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 C5orf49A4QMS7 147 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 CD300LBA8K4G0 201 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 PPP5D1E7EU14 171 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 SOX15O60248 233 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 TRAPPC6AO75865 159 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 EGR1P18146 543 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 PI4KAP42356 2102 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 SSR4P51571 173 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 FAM3BP58499 235 aaPredicted RBP11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 KIR2DS1Q14954 304 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 FIP1L1Q6UN15 594 aaKnown RBP11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 OR10V1Q8NGI7 309 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 SGCZQ96LD1 299 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 C1QTNF5Q9BXJ0 243 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 ACTR3CQ9C0K3 210 aaPredicted RBP11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 CTDSP1Q9GZU7 261 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 PRDM6Q9NQX0 595 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 PRRC2CQ9Y520 2896 aaKnown RBP11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 TRAV24A0A0B4J272 114 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 IGHV3-64DA0A0J9YX35 117 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 H7BYZ3 331 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 COX6A1P12074 109 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 CYP2G1PQ6ZSU1 146 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 Q8NFD4 153 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 RAB24Q969Q5 203 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 NEU1Q99519 415 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 P2RX4Q99571 388 aa11.82□□□□□ -0.52
SCNN1A-215ENST00000540037 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 ZNF585BQ52M93 769 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 TAF15Q92804 592 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 SPSB4Q96A44 273 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 ADGRG7Q96K78 797 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 IMMP1LQ96LU5 166 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 PYGO2Q9BRQ0 406 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 SF3B5Q9BWJ5 86 aaKnown RBP11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 CBLN4Q9NTU7 201 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 TP53TG5Q9Y2B4 290 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 URB1O60287 2271 aaKnown RBP11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 LY6G6EA0A0G2JKS1 128 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 WDR1O75083 606 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 CBR3O75828 277 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 KBTBD11O94819 623 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 SPCS3P61009 180 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 OR4F5Q8NH21 305 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 OR4F4Q96R69 305 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 KCNS2Q9ULS6 477 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 U3KQA8 63 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 TGOLN2O43493 480 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 RHBDL1O75783 438 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 CD33P20138 364 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 PMP22Q01453 160 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 RPS19BP1Q86WX3 136 aaKnown RBP11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 MRPL41Q8IXM3 137 aaKnown RBP11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 OR5P3Q8WZ94 311 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 SNHG12Q9BXW3 62 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 ZNF391Q9UJN7 358 aa11.81□□□□□ -0.52
SCNN1A-215ENST00000540037 C1QTNF9BB2RNN3 333 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 CHRNA7P36544 502 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 SLC10A1Q14973 349 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 PSMF1Q92530 271 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 MRPL37Q9BZE1 423 aaKnown RBP11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 SH2D2AQ9NP31 389 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 RBM7Q9Y580 266 aaKnown RBP11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 MED12LQ86YW9 2145 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 CACNA1DQ01668 2161 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 NUTF2P61970 127 aaKnown RBP11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 PAX5Q02548 391 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 SLC38A11Q08AI6 406 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 MKXQ8IYA7 352 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 OR5B12Q96R08 314 aa11.8□□□□□ -0.52
SCNN1A-215ENST00000540037 GTF3C1Q12789 2109 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 NUPR1O60356 82 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 KLF7O75840 302 aaPredicted RBP11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 HBG1P69891 147 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 HBG2P69892 147 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 SERF2P84101 59 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 CEACAM21Q3KPI0 293 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 MRPL21Q7Z2W9 205 aaKnown RBP11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 NOL4LQ96MY1 436 aaPredicted RBP11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 IER2Q9BTL4 223 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 TOX3O15405 576 aaPredicted RBP11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 CLDN1O95832 211 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 WNT5AP41221 380 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 ARF1P84077 181 aaKnown RBP11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 SRYQ05066 204 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 SPINK9Q5DT21 86 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 TMEM170AQ8WVE7 144 aa11.79□□□□□ -0.52
SCNN1A-215ENST00000540037 FAM90A10PA6NDY2 464 aa11.78□□□□□ -0.52
SCNN1A-215ENST00000540037 FAM90A18PA6NE21 464 aa11.78□□□□□ -0.52
SCNN1A-215ENST00000540037 FAM90A16PA6NEW6 464 aa11.78□□□□□ -0.52
SCNN1A-215ENST00000540037 PGPEP1LA6NFU8 196 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 916 ms