RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 IGKV1-33P01594 117 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 LPLP06858 475 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 CSF1P09603 554 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 RAB3BP20337 219 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 SDC2P34741 201 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 SERPINB10P48595 397 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 ZNF134P52741 427 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 GNMTQ14749 295 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 HMGN3Q15651 99 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 GALMQ96C23 342 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 JPT1Q9UK76 154 aa16.07■□□□□ 0.16
VPS36-204ENST00000480923 TMEM272A0A1B0GTI8 110 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 NAPSAO96009 420 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 PPP1CCP36873 323 aaKnown RBP16.06■□□□□ 0.16
VPS36-204ENST00000480923 MORN2Q502X0 79 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 MOB1BQ7L9L4 216 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 OR56B1Q8NGI3 324 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 RTN4IP1Q8WWV3 396 aaPredicted RBP16.06■□□□□ 0.16
VPS36-204ENST00000480923 IL1F10Q8WWZ1 152 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 WNT10AQ9GZT5 417 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 RIMS4Q9H426 269 aaPredicted RBP16.06■□□□□ 0.16
VPS36-204ENST00000480923 AK3Q9UIJ7 227 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 RAB22AQ9UL26 194 aa16.06■□□□□ 0.16
VPS36-204ENST00000480923 IFITM5A6NNB3 132 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 LDLRAD4O15165 306 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 RGS11O94810 467 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 AMY1AP04745 511 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 AMY2AP04746 511 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 CD28P10747 220 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 TGFBR1P36897 503 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 HTD2P86397 168 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 PLA2G7Q13093 441 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 STEAP3Q658P3 488 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 TGIF2LXQ8IUE1 241 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 LYG1Q8N1E2 194 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 FAM110DQ8TAY7 271 aaPredicted RBP16.05■□□□□ 0.16
VPS36-204ENST00000480923 ST6GALNAC6Q969X2 333 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 ARHGAP5-AS1Q96IT6 56 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 HDHD3Q9BSH5 251 aaPredicted RBP16.05■□□□□ 0.16
VPS36-204ENST00000480923 PECRQ9BY49 303 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 DCSTAMPQ9H295 470 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 HSF4Q9ULV5 492 aa16.05■□□□□ 0.16
VPS36-204ENST00000480923 FOXI3A8MTJ6 420 aaPredicted RBP16.04■□□□□ 0.16
VPS36-204ENST00000480923 TXNL1O43396 289 aa16.04■□□□□ 0.16
VPS36-204ENST00000480923 TMEM50BP56557 158 aa16.04■□□□□ 0.16
VPS36-204ENST00000480923 MXD1Q05195 221 aa16.04■□□□□ 0.16
VPS36-204ENST00000480923 ZNF880Q6PDB4 577 aa16.04■□□□□ 0.16
VPS36-204ENST00000480923 Q6ZPA2 131 aa16.04■□□□□ 0.16
VPS36-204ENST00000480923 ABHD14AQ9BUJ0 271 aa16.04■□□□□ 0.16
VPS36-204ENST00000480923 SMIM30A4D0T7 59 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 YPEL1O60688 119 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 RPS19P39019 145 aaKnown RBP16.03■□□□□ 0.16
VPS36-204ENST00000480923 ZNF137PP52743 207 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 EBI3Q14213 229 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 SPCS2Q15005 226 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 FOXB2Q5VYV0 432 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 CENPVQ7Z7K6 275 aaPredicted RBP16.03■□□□□ 0.16
VPS36-204ENST00000480923 IZUMO1Q8IYV9 350 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 OR2T10Q8NGZ9 312 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 WIPF2Q8TF74 440 aaPredicted RBP16.03■□□□□ 0.16
VPS36-204ENST00000480923 EAF1Q96JC9 268 aaPredicted RBP16.03■□□□□ 0.16
VPS36-204ENST00000480923 YPEL2Q96QA6 119 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 CMSS1Q9BQ75 279 aaKnown RBP16.03■□□□□ 0.16
VPS36-204ENST00000480923 C12orf4Q9NQ89 552 aa16.03■□□□□ 0.16
VPS36-204ENST00000480923 TRRAPQ9Y4A5 3859 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 MGAM2Q2M2H8 2515 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 TRBV6-6A0A0A6YYG2 114 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 A0A0B4J203 849 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 NOTOA8MTQ0 251 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 FGF16O43320 207 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 CD1BP29016 333 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 NSUN5P1Q3KNT7 163 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 PLAC9Q5JTB6 97 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 CROCCP3Q8IVE0 287 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 C5orf56Q8N8D9 126 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 OR2AK2Q8NG84 335 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 OR5AU1Q8NGC0 362 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 MGAT4AQ9UM21 535 aa16.02■□□□□ 0.16
VPS36-204ENST00000480923 NCBP2LA6PVI3 153 aaKnown RBP16.01■□□□□ 0.15
VPS36-204ENST00000480923 LANCL1O43813 399 aa16.01■□□□□ 0.15
VPS36-204ENST00000480923 CLEC2LP0C7M8 214 aa16.01■□□□□ 0.15
VPS36-204ENST00000480923 SLC2A2P11168 524 aaPredicted RBP16.01■□□□□ 0.15
VPS36-204ENST00000480923 HLA-DRB3P79483 266 aa16.01■□□□□ 0.15
VPS36-204ENST00000480923 MRPS15P82914 257 aaKnown RBP16.01■□□□□ 0.15
VPS36-204ENST00000480923 NR2C2APQ86WQ0 139 aa16.01■□□□□ 0.15
VPS36-204ENST00000480923 SLC25A46Q96AG3 418 aa16.01■□□□□ 0.15
VPS36-204ENST00000480923 RAB3CQ96E17 227 aa16.01■□□□□ 0.15
VPS36-204ENST00000480923 CITED2Q99967 270 aaPredicted RBP16.01■□□□□ 0.15
VPS36-204ENST00000480923 ZNF736B4DX44 427 aaPredicted RBP16■□□□□ 0.15
VPS36-204ENST00000480923 MOSP00540 346 aa16■□□□□ 0.15
VPS36-204ENST00000480923 RAB6AP20340 208 aa16■□□□□ 0.15
VPS36-204ENST00000480923 RORCP51449 518 aa16■□□□□ 0.15
VPS36-204ENST00000480923 MOGAT2Q3SYC2 334 aa16■□□□□ 0.15
VPS36-204ENST00000480923 LY6G6FQ5SQ64 297 aa16■□□□□ 0.15
VPS36-204ENST00000480923 Q9N2K0 584 aa16■□□□□ 0.15
VPS36-204ENST00000480923 TET2Q6N021 2002 aaPredicted RBP16■□□□□ 0.15
VPS36-204ENST00000480923 A0A075B6Q4 140 aa15.99■□□□□ 0.15
VPS36-204ENST00000480923 METTL21EPA6NDL7 271 aa15.99■□□□□ 0.15
VPS36-204ENST00000480923 ST8SIA5O15466 376 aa15.99■□□□□ 0.15
VPS36-204ENST00000480923 TMEM127O75204 238 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms