RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 FHITP49789 147 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 VAMP2P63027 116 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 CD177Q8N6Q3 437 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 PLEKHF2Q9H8W4 249 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 TREM1Q9NP99 234 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 KIAA1324LA8MWY0 1029 aaPredicted RBP10.9□□□□□ -0.66
SEC13-216ENST00000479868 MKRN2OSH3BPM6 223 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 TSPAN4O14817 238 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 C1QL1O75973 258 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 CST7O76096 145 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 IGKV1-5P01602 117 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 CRYAAP02489 173 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 DANCRP0C864 163 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 IL2RGP31785 369 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 SSTR5P35346 364 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 F2RL1P55085 397 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 PAX9P55771 341 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 FAM27E3Q08E93 113 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 GUCA2BQ16661 112 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 KRTCAP3Q53RY4 240 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 KRBOX4Q5JUW0 171 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 VHLLQ6RSH7 139 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 FAM180AQ6UWF9 173 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 MUCL1Q96DR8 90 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 C5orf30Q96GV9 206 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 SFXN3Q9BWM7 321 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 UQCC1Q9NVA1 299 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 RNF150Q9ULK6 438 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 RFNGQ9Y644 331 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 SMG1Q96Q15 3661 aaKnown RBP10.9□□□□□ -0.66
SEC13-216ENST00000479868 A0A1B0GU03 582 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 IFNL4K9M1U5 179 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 BMP5P22003 454 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 CD200P41217 278 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 NKX6-1P78426 367 aaPredicted RBP10.9□□□□□ -0.66
SEC13-216ENST00000479868 SWI5Q1ZZU3 235 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 ZNF295-AS1Q8N0V1 137 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 OR13A1Q8NGR1 328 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 LYPD6BQ8NI32 183 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 RNASE11Q8TAA1 199 aaKnown RBP10.9□□□□□ -0.66
SEC13-216ENST00000479868 TSNAXQ99598 290 aaKnown RBP10.9□□□□□ -0.66
SEC13-216ENST00000479868 OR2D2Q9H210 308 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 LIN7CQ9NUP9 197 aaKnown RBP10.9□□□□□ -0.66
SEC13-216ENST00000479868 CACNG5Q9UF02 275 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 TP53TG5Q9Y2B4 290 aa10.9□□□□□ -0.66
SEC13-216ENST00000479868 WRBO00258 174 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 IGHV3-13P01766 116 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 SLC25A6P12236 298 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 ZNF273Q14593 569 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 TMEM217Q8N7C4 229 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 OR5C1Q8NGR4 320 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 NKX6-2Q9C056 277 aaPredicted RBP10.89□□□□□ -0.67
SEC13-216ENST00000479868 SLC25A31Q9H0C2 315 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 A8MXE2 369 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 SRRM5B3KS81 715 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 ATP6V1G2-DDX39BF2Z307 99 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 F8W036 122 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 MMP9P14780 707 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 PRDX2P32119 198 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 GLRXP35754 106 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 PPP1CCP36873 323 aaKnown RBP10.89□□□□□ -0.67
SEC13-216ENST00000479868 DYNLT3P51808 116 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 KLF3P57682 345 aaPredicted RBP10.89□□□□□ -0.67
SEC13-216ENST00000479868 B2MP61769 119 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 MZT1Q08AG7 82 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 C10orf91Q5T1B1 145 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 C16orf54Q6UWD8 224 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 PUSL1Q8N0Z8 303 aaKnown RBP10.89□□□□□ -0.67
SEC13-216ENST00000479868 ZNF645Q8N7E2 425 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 LSM10Q969L4 123 aaKnown RBP10.89□□□□□ -0.67
SEC13-216ENST00000479868 OR2V2Q96R30 315 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 DCTN5Q9BTE1 182 aa10.89□□□□□ -0.67
SEC13-216ENST00000479868 IGKV1D-17A0A075B6S4 117 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 MED19A0JLT2 244 aaPredicted RBP10.88□□□□□ -0.67
SEC13-216ENST00000479868 H3BP45 60 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 DNASE2O00115 360 aaPredicted RBP10.88□□□□□ -0.67
SEC13-216ENST00000479868 F12P00748 615 aaPredicted RBP10.88□□□□□ -0.67
SEC13-216ENST00000479868 ZNF616Q08AN1 781 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 FOXC1Q12948 553 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 ZNF266Q14584 549 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 GCSAMQ8N6F7 178 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 RFESDQ8TAC1 157 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 CACFD1Q9UGQ2 172 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 PCNX1Q96RV3 2341 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 IGHV3-43A0A0B4J1X8 118 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 FAM74A7A6NL05 159 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 ZNF737O75373 536 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 IGHV3-43DP0DP04 118 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 TDGF1P3P51864 188 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 EDDM3AQ14507 147 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 C3orf36Q3SXR2 165 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 FAM74A3Q4VXF1 159 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 MIDNQ504T8 468 aa10.88□□□□□ -0.67
SEC13-216ENST00000479868 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
SEC13-216ENST00000479868 ZNF808Q8N4W9 903 aaPredicted RBP10.88□□□□□ -0.67
SEC13-216ENST00000479868 CARHSP1Q9Y2V2 147 aaKnown RBP10.88□□□□□ -0.67
SEC13-216ENST00000479868 IGLV3-9A0A075B6K5 115 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 IGHV3OR15-7A0A075B7D8 119 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 PIGBOS1A0A0B4J2F0 54 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 C9JQL5 133 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms