RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 SSX6Q7RTT6 188 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 OR51L1Q8NGJ5 315 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 OR6N1Q8NGY5 312 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 OR2T4Q8NH00 348 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 FNDC8Q8TC99 324 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 CNBD2Q96M20 576 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 AMELYQ99218 206 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 TMEM165Q9HC07 324 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 FGF20Q9NP95 211 aaPredicted RBP4.39□□□□□ -1.71
SSR3-207ENST00000478842 TUBG2Q9NRH3 451 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 TNFRSF19Q9NS68 423 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 IMPAD1Q9NX62 359 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 WARS2Q9UGM6 360 aaKnown RBP4.39□□□□□ -1.71
SSR3-207ENST00000478842 COPS3Q9UNS2 423 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 ZNF816-ZNF321PA0A0X1KG74 233 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 OR6C6A6NF89 314 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 TVP23AA6NH52 213 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 CEACAM18A8MTB9 384 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 SRSF10O75494 262 aaKnown RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 NR2C1P13056 603 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 CCL2P13500 99 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 FOLR2P14207 255 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 MSR1P21757 451 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 PAICSP22234 425 aaKnown RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 LAP3P28838 519 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 CRABP1P29762 137 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 OTX1P32242 354 aaPredicted RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 NAA10P41227 235 aaPredicted RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 FGF12P61328 243 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 LSM6P62312 80 aaKnown RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 GNB2P62879 340 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 TNFAIP6P98066 277 aaPredicted RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 EMX1Q04741 257 aaPredicted RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 GLO1Q04760 184 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 RAB40BQ12829 278 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 EXOSC2Q13868 293 aaKnown RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 FAM27BQ5VT28 67 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 RNLSQ5VYX0 342 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 DNM1P34Q6PK57 102 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 PROKR2Q8NFJ6 384 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 OR4S1Q8NGB4 309 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 OR52I1Q8NGK6 324 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 OTOSQ8NHW6 89 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 RPS4Y2Q8TD47 263 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 KLF14Q8TD94 323 aaPredicted RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 RAB3CQ96E17 227 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 CNN2Q99439 309 aaKnown RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 TEAD3Q99594 435 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 OR51B6Q9H340 312 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 Q9H521 79 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 WDR76Q9H967 626 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 CLN6Q9NWW5 311 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 CLEC5AQ9NY25 188 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 CYB5R1Q9UHQ9 305 aa4.38□□□□□ -1.71
SSR3-207ENST00000478842 LSM2Q9Y333 95 aaKnown RBP4.38□□□□□ -1.71
SSR3-207ENST00000478842 A0A0U1RQV5 110 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 CENPVL3A0A0U1RRI6 287 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 ZNF879B4DU55 563 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 RNASEK-C17orf49H0YIS7 233 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 C3orf84H3BNL1 204 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 PHYHO14832 338 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 ENSAO43768 121 aaKnown RBP4.37□□□□□ -1.71
SSR3-207ENST00000478842 DIRAS3O95661 229 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 CDK1P06493 297 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 MRPL3P09001 348 aaKnown RBP4.37□□□□□ -1.71
SSR3-207ENST00000478842 CST2P09228 141 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 GSTT2P0CG29 244 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 GSTT2BP0CG30 244 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 CALCBP10092 127 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 RPS2P15880 293 aaKnown RBP4.37□□□□□ -1.71
SSR3-207ENST00000478842 ALOX5APP20292 161 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 STOMP27105 288 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 APLNRP35414 380 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 MPV17P39210 176 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 RPS27P42677 84 aaKnown RBP4.37□□□□□ -1.71
SSR3-207ENST00000478842 BLVRAP53004 296 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 MED21Q13503 144 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 RSPO1Q2MKA7 263 aaPredicted RBP4.37□□□□□ -1.71
SSR3-207ENST00000478842 KLHL12Q53G59 568 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 TMEM255AQ5JRV8 349 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 RBM48Q5RL73 367 aaKnown RBP4.37□□□□□ -1.71
SSR3-207ENST00000478842 XAF1Q6GPH4 301 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 ZNF773Q6PK81 442 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 ZNF600Q6ZNG1 722 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 AHSA2Q719I0 299 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 SLC16A14Q7RTX9 510 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 SLC35F2Q8IXU6 374 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 ZNF101Q8IZC7 436 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 SPERTQ8NA61 448 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 OR51G2Q8NGK0 314 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 OR6K6Q8NGW6 343 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 SLC25A40Q8TBP6 338 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 RNF133Q8WVZ7 376 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 RBP7Q96R05 134 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 SH3GL3Q99963 347 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 CDCA4Q9BXL8 241 aa4.37□□□□□ -1.71
SSR3-207ENST00000478842 YTHDF1Q9BYJ9 559 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms