RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 CABLES2Q9BTV7 478 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 REPIN1Q9BWE0 567 aaKnown RBP9.96□□□□□ -0.82
NPHP4-204ENST00000460696 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.96□□□□□ -0.82
NPHP4-204ENST00000460696 BTBD17A6NE02 478 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 H7BYZ3 331 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 PGLYRP1O75594 196 aaPredicted RBP9.96□□□□□ -0.82
NPHP4-204ENST00000460696 NEURL1O76050 574 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 RD3LP0DJH9 198 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 G6PCP35575 357 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 UCP2P55851 309 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 SRSF3P84103 164 aaKnown RBP9.96□□□□□ -0.82
NPHP4-204ENST00000460696 DHRS11Q6UWP2 260 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 GMPPAQ96IJ6 420 aaPredicted RBP9.96□□□□□ -0.82
NPHP4-204ENST00000460696 NAV2Q8IVL1 2488 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 PPP1R2P9O14990 202 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 NAT1P18440 290 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 ERVS71-1P61550 626 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 FAM214BQ7L5A3 538 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 SCCPDHQ8NBX0 429 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 RSG1Q9BU20 258 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 MAP1LC3BQ9GZQ8 125 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 RNF122Q9H9V4 155 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 PRR14LQ5THK1 2151 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 ENSAO43768 121 aaKnown RBP9.95□□□□□ -0.82
NPHP4-204ENST00000460696 COX5AP20674 150 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 HGFACQ04756 655 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 ABLIM2Q6H8Q1 611 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 LHFPL1Q86WI0 220 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 CYYR1Q96J86 154 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 ATP5SQ99766 215 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 SSX3Q99909 188 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 C1QTNF5Q9BXJ0 243 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 PRSS44E7EML9 344 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 LHX2P50458 406 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 FABP9Q0Z7S8 132 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 PLA2G2CQ5R387 149 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 ACTR3CQ9C0K3 210 aaPredicted RBP9.95□□□□□ -0.82
NPHP4-204ENST00000460696 CXXC4Q9H2H0 198 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 SERTAD4Q9NUC0 356 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 CACFD1Q9UGQ2 172 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 DOCK11Q5JSL3 2073 aa9.95□□□□□ -0.82
NPHP4-204ENST00000460696 WIPF3A6NGB9 483 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 HNF1AP20823 631 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 MPZP25189 248 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 SELENOHQ8IZQ5 122 aaKnown RBP9.94□□□□□ -0.82
NPHP4-204ENST00000460696 OR52L2PQ8NGH6 319 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 GALNT14Q96FL9 552 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 CIB3Q96Q77 187 aaPredicted RBP9.94□□□□□ -0.82
NPHP4-204ENST00000460696 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 DECR2Q9NUI1 292 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 MED13Q9UHV7 2174 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 ZNF705GA8MUZ8 300 aaPredicted RBP9.94□□□□□ -0.82
NPHP4-204ENST00000460696 GNG10P50151 68 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 SULT1A1P50225 295 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 C1orf87Q8N0U7 546 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 ABHD5Q8WTS1 349 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 CA5BP1Q8WTZ4 195 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 PINX1Q96BK5 328 aaKnown RBP9.94□□□□□ -0.82
NPHP4-204ENST00000460696 GPR146Q96CH1 333 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 WBP1Q96G27 269 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 ABHD14BQ96IU4 210 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 LOC105371267A0A1B0GV96 52 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 OPN1MWP04001 364 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 OPN1MW2P0DN77 364 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 OPN1MW3P0DN78 364 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 CLDN18P56856 261 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 FFAR4Q5NUL3 377 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 LYG1Q8N1E2 194 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 OR1L1Q8NH94 360 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 C1orf147Q96MC9 270 aaPredicted RBP9.94□□□□□ -0.82
NPHP4-204ENST00000460696 TAAR6Q96RI8 345 aa9.94□□□□□ -0.82
NPHP4-204ENST00000460696 NOTCH3Q9UM47 2321 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 PROB1E7EW31 1015 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 SLC25A6P12236 298 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 INO80CQ6PI98 192 aaPredicted RBP9.93□□□□□ -0.82
NPHP4-204ENST00000460696 DNM1P46Q6ZS02 220 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 TMEM45BQ96B21 275 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 LINC00470Q9BZP3 86 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 LAMP3Q9UQV4 416 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 IGHV3OR15-7A0A075B7D8 119 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 A0A1B0GU03 582 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A10PA6NDY2 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A18PA6NE21 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A16PA6NEW6 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A20PA6NIJ5 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A8PA6NJQ4 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A7PA6NKC0 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A22PA8MWA6 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A12PA8MX19 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A5PA8MXJ8 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A23PA8MXZ1 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 F8VVB4 439 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 F8VWA3 439 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 CELA3BP08861 270 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A15PP0C7V4 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A13PP0C7W8 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A14PP0C7W9 464 aa9.93□□□□□ -0.82
NPHP4-204ENST00000460696 FAM90A24PP0C7X0 464 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms