RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 IRF2P14316 349 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 STUMQ69YW2 141 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 OR52L2PQ8NGH6 319 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 LHFPL5Q8TAF8 219 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 GALMQ96C23 342 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 C3orf85A0A1B0GTC6 90 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 K7N7A8 449 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 GNMTQ14749 295 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 OR10V1Q8NGI7 309 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 MSI2Q96DH6 328 aaKnown RBP17.6■□□□□ 0.41
PTPRF-207ENST00000436724 FBXO9Q9UK97 447 aaPredicted RBP17.6■□□□□ 0.41
PTPRF-207ENST00000436724 IL2RGP31785 369 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 EDDM3BP56851 147 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 MEX3BQ6ZN04 569 aaKnown RBP17.59■□□□□ 0.41
PTPRF-207ENST00000436724 LYZL2Q7Z4W2 148 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 CCL17Q92583 94 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 CCL13Q99616 98 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 CYTL1Q9NRR1 136 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 TAS2R3Q9NYW6 316 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 GSKIPQ9P0R6 139 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 MGST3O14880 152 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 IGLV2-14P01704 120 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 OR8U9P0C7N5 309 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 LYL1P12980 280 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 LOXP28300 417 aaPredicted RBP17.59■□□□□ 0.41
PTPRF-207ENST00000436724 GGNBP1Q5YKI7 109 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 LIAT1Q6ZQX7 453 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 OR8U1Q8NH10 309 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 STOML3Q8TAV4 291 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 ARL11Q969Q4 196 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 SUCNR1Q9BXA5 334 aa17.59■□□□□ 0.41
PTPRF-207ENST00000436724 RBM7Q9Y580 266 aaKnown RBP17.59■□□□□ 0.41
PTPRF-207ENST00000436724 ODAMA1E959 279 aa17.58■□□□□ 0.4
PTPRF-207ENST00000436724 PAX5Q02548 391 aa17.58■□□□□ 0.4
PTPRF-207ENST00000436724 IL15RAQ13261 267 aa17.58■□□□□ 0.4
PTPRF-207ENST00000436724 ATRAIDQ6UW56 229 aa17.58■□□□□ 0.4
PTPRF-207ENST00000436724 FAM216BQ8N7L0 139 aa17.58■□□□□ 0.4
PTPRF-207ENST00000436724 EGLN1Q9GZT9 426 aa17.58■□□□□ 0.4
PTPRF-207ENST00000436724 SEBOXQ9HB31 216 aaPredicted RBP17.58■□□□□ 0.4
PTPRF-207ENST00000436724 ZFYVE26Q68DK2 2539 aa17.58■□□□□ 0.4
PTPRF-207ENST00000436724 IGHV3-43A0A0B4J1X8 118 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 TSPAN4O14817 238 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 SIGLEC5O15389 551 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 IGHV3-43DP0DP04 118 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 EFNB3Q15768 340 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 C4orf17Q53FE4 359 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 CMTM1Q8IZ96 169 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 FAM185AQ8N0U4 392 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 FGFRL1Q8N441 504 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 GAFA1Q96PS6 74 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 MS4A5Q9H3V2 200 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 OR5AC2Q9NZP5 309 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 B9A039 149 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 PGLYRP1O75594 196 aaPredicted RBP17.57■□□□□ 0.4
PTPRF-207ENST00000436724 RND3P61587 244 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 LTC4SQ16873 150 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 PRSS54Q6PEW0 395 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 MUC15Q8N387 334 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 ZNF561Q8N587 486 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 BPIFCQ8NFQ6 507 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 PPP1R35Q8TAP8 253 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 SDSLQ96GA7 329 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 LURAP1Q96LR2 239 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 C2orf50Q96LR7 162 aa17.57■□□□□ 0.4
PTPRF-207ENST00000436724 MSGN1A6NI15 193 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 LRRC30A6NM36 301 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 C15orf65H3BRN8 121 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 FGF16O43320 207 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 APOC3P02656 99 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 PPP1CCP36873 323 aaKnown RBP17.56■□□□□ 0.4
PTPRF-207ENST00000436724 IAH1Q2TAA2 248 aaPredicted RBP17.56■□□□□ 0.4
PTPRF-207ENST00000436724 ZNF672Q499Z4 452 aaPredicted RBP17.56■□□□□ 0.4
PTPRF-207ENST00000436724 TEX36Q5VZQ5 186 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 OR1S2Q8NGQ3 325 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 TMEM222Q9H0R3 208 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 KCNS2Q9ULS6 477 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 ZNF273Q14593 569 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 ITLN2Q8WWU7 325 aaPredicted RBP17.56■□□□□ 0.4
PTPRF-207ENST00000436724 C18orf12Q96KH6 178 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 OR2S2Q9NQN1 319 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 RNF150Q9ULK6 438 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 UBE2J1Q9Y385 318 aaPredicted RBP17.56■□□□□ 0.4
PTPRF-207ENST00000436724 COL12A1Q99715 3063 aa17.56■□□□□ 0.4
PTPRF-207ENST00000436724 MUC1P15941 1255 aaPredicted RBP17.55■□□□□ 0.4
PTPRF-207ENST00000436724 RAB32Q13637 225 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 SWI5Q1ZZU3 235 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 TMEM268Q5VZI3 342 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 ZNF788Q6ZQV5 615 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 LGI3Q8N145 548 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 SLC35G3Q8N808 338 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 LRTM2Q8N967 370 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 OR51H1Q8NH63 302 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 TMEM178BH3BS89 294 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 TRIM77I1YAP6 450 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 TPT1P13693 172 aaKnown RBP17.55■□□□□ 0.4
PTPRF-207ENST00000436724 OMGP23515 440 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 BAP18Q8IXM2 172 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 MARC2Q969Z3 335 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 TMEM204Q9BSN7 226 aa17.55■□□□□ 0.4
PTPRF-207ENST00000436724 ZNF665Q9H7R5 613 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms