RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 REPIN1Q9BWE0 567 aaKnown RBP10.28□□□□□ -0.76
SHANK2-201ENST00000338508 OR2H1Q9GZK4 316 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 K7ERU9 68 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 WNT9BO14905 357 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 OR2A4O95047 310 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 CYB5R3P00387 301 aaPredicted RBP10.28□□□□□ -0.76
SHANK2-201ENST00000338508 CX3CL1P78423 397 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 ZNF383Q8NA42 475 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 OR2A7Q96R45 310 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 WNT5BQ9H1J7 359 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 HEATR1Q9H583 2144 aaKnown RBP10.28□□□□□ -0.76
SHANK2-201ENST00000338508 CISD1Q9NZ45 108 aaKnown RBP10.28□□□□□ -0.76
SHANK2-201ENST00000338508 TBX21Q9UL17 535 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 HYPMO75409 117 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 PRR35P0CG20 571 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 LDLRAD4O15165 306 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
SHANK2-201ENST00000338508 TTC32Q5I0X7 151 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 TEX30Q5JUR7 227 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 TMEM38BQ9NVV0 291 aa10.28□□□□□ -0.76
SHANK2-201ENST00000338508 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 PCMT1P22061 227 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 CRYBB2P43320 205 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 TMEM50BP56557 158 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 ARF6P62330 175 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 MRPL24Q96A35 216 aaKnown RBP10.27□□□□□ -0.76
SHANK2-201ENST00000338508 CA10Q9NS85 328 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 WBP1LQ9NX94 342 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 CYB5R1Q9UHQ9 305 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 BTAF1O14981 1849 aa10.27□□□□□ -0.76
SHANK2-201ENST00000338508 EIF3GO75821 320 aaKnown RBP eCLIP10.27□□□□□ -0.77
SHANK2-201ENST00000338508 GPX1P07203 203 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 ACVR1Q04771 509 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 MBNL2Q5VZF2 373 aaKnown RBP10.27□□□□□ -0.77
SHANK2-201ENST00000338508 OR2Y1Q8NGV0 311 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 FRRS1LQ9P0K9 344 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 IGF2P01344 180 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 EID2BQ96D98 161 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 PDE6DO43924 150 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 DNAL4O96015 105 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 IFT22Q9H7X7 185 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 B4E171 279 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 SFTPCP11686 197 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 WDFY1Q8IWB7 410 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 HSPB7Q9UBY9 170 aa10.27□□□□□ -0.77
SHANK2-201ENST00000338508 B4DEV8 164 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 GAPDHP04406 335 aaKnown RBP10.26□□□□□ -0.77
SHANK2-201ENST00000338508 PGA4P0DJD7 388 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 PGA5P0DJD9 388 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 NOVP48745 357 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 GPBAR1Q8TDU6 330 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 ITLN2Q8WWU7 325 aaPredicted RBP10.26□□□□□ -0.77
SHANK2-201ENST00000338508 TMEM238LA0A1B0GVL6 79 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 A6NJY4 79 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 CDC42EP2O14613 210 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 C12orf73Q69YU5 71 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 SPAG8Q99932 426 aaPredicted RBP10.26□□□□□ -0.77
SHANK2-201ENST00000338508 A0A1W2PS18 150 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
SHANK2-201ENST00000338508 CBLN2Q8IUK8 224 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 WIPI2Q9Y4P8 454 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 SSC5DA1L4H1 1573 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 MTCL1Q9Y4B5 1905 aaKnown RBP10.26□□□□□ -0.77
SHANK2-201ENST00000338508 PROB1E7EW31 1015 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 RBFOX2O43251 390 aaKnown RBP eCLIP10.26□□□□□ -0.778e-7■■■□□ 16.8
SHANK2-201ENST00000338508 CD99P14209 185 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 PRSS42Q7Z5A4 293 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 PGLYRP3Q96LB9 341 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 MRM2Q9UI43 246 aaKnown RBP10.26□□□□□ -0.77
SHANK2-201ENST00000338508 S4R3C0 116 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 FCARP24071 287 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 ASB5Q8WWX0 329 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 SLC17A5Q9NRA2 495 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 TCRBV5S1A1TA0A578 114 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 CELA2AP08217 269 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 P2RY1P47900 373 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
SHANK2-201ENST00000338508 EWSR1Q01844 656 aaKnown RBP eCLIP10.26□□□□□ -0.77
SHANK2-201ENST00000338508 MESTQ5EB52 335 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 GPR82Q96P67 336 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 RAB33BQ9H082 229 aa10.26□□□□□ -0.77
SHANK2-201ENST00000338508 TRBV5-4A0A0C4DH59 114 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 TMPRSS3P57727 454 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 TTTY12Q9BZ98 90 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 CTGFP29279 349 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 OR2W1Q9Y3N9 320 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 LIPT2A6NK58 231 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 KLK8O60259 260 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 TGFAP01135 160 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 ZNF826PQ6ZT77 177 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 PI4KAP42356 2102 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 TMEM229AB2RXF0 380 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 ANOS1P23352 680 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 RPL27AP46776 148 aaKnown RBP10.25□□□□□ -0.77
SHANK2-201ENST00000338508 PLP1P60201 277 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 FXYD3Q14802 87 aa10.25□□□□□ -0.77
SHANK2-201ENST00000338508 DOCK5Q9H7D0 1870 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms